Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 RNU1-130P-201ENST00000363930 160 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 AL024474.1-201ENST00000404655 591 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 MIR1284-201ENST00000408337 120 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 RPL21P108-201ENST00000413857 481 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC119751.6-201ENST00000416712 186 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 CENPIP1-201ENST00000425713 902 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 OR51AB1P-201ENST00000429046 620 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 MTND5P25-201ENST00000430499 799 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 UBE2V1P3-201ENST00000439651 417 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC114495.1-201ENST00000441274 436 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 ARL2BPP10-201ENST00000446487 531 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 RPL39P6-201ENST00000448289 150 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 MTND2P19-201ENST00000449129 1012 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AL109741.2-201ENST00000455561 343 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 RPL21P103-201ENST00000479921 488 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX2-2O95096 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX2-2O95096 HIGD1AP3-201ENST00000515857 278 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AF186190.1-201ENST00000517470 480 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 CENPUP2-201ENST00000555897 1186 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AL390726.5-202ENST00000564800 256 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AC087283.1-201ENST00000604029 1074 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AL160290.3-201ENST00000604869 165 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC006270.3-201ENST00000605967 1036 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AL008729.2-201ENST00000606393 473 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC004948.1-201ENST00000609858 672 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-2O95096 MTND2P41-201ENST00000637599 773 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX2-2O95096 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NKX2-2O95096 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AC012618.3-205ENST00000637896 1496 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 PABPC1P7-201ENST00000413177 1513 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 MIR129-1-201ENST00000384972 72 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 MIR3065-201ENST00000390137 79 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NKX2-2O95096 RPL23AP29-201ENST00000397284 453 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 ATP5F1P4-201ENST00000397288 746 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 ARF4P3-201ENST00000397387 509 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 RPEP3-201ENST00000425462 676 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 RPL23AP1-201ENST00000428990 471 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 PSMA2P3-201ENST00000429685 675 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 MTCYBP34-201ENST00000439552 670 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AL138878.2-201ENST00000440581 1241 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 ATG12P2-201ENST00000456830 416 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AL136126.1-201ENST00000473603 402 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 RPL23AP72-201ENST00000492447 435 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
NKX2-2O95096 TMEM248P1-201ENST00000510579 951 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC090819.1-201ENST00000523800 1111 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC100770.1-201ENST00000532310 322 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms