Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.51□□□□□ -1.69
CNOT3O75175 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.51□□□□□ -1.69
CNOT3O75175 AC105129.1-201ENST00000560250 297 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 ROCK1P1-201ENST00000573767 549 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.51□□□□□ -1.69
CNOT3O75175 OR4K7P-201ENST00000580232 945 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.51□□□□□ -1.69
CNOT3O75175 AC073091.2-201ENST00000603205 907 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 AC018714.1-201ENST00000605028 208 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 AC026368.1-201ENST00000614934 690 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 AC116165.2-201ENST00000616705 206 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.51□□□□□ -1.69
CNOT3O75175 AL359740.1-201ENST00000624340 592 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 MIR7641-1-201ENST00000627518 61 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT3O75175 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT3O75175 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT3O75175 SMG1P6-201ENST00000532337 2930 ntBASIC4.51□□□□□ -1.69
CNOT3O75175 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT3O75175 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT3O75175 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT3O75175 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
CNOT3O75175 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT3O75175 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.5□□□□□ -1.69
CNOT3O75175 AL442639.1-201ENST00000625030 1899 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AL672167.1-206ENST00000356293 943 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 RNA5SP513-201ENST00000364648 118 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 Y_RNA.311-201ENST00000365068 96 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 RNU6-178P-201ENST00000384631 104 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNOT3O75175 RPS4XP9-201ENST00000405151 780 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 RN7SKP222-201ENST00000410651 315 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 RNU2-42P-201ENST00000410697 113 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AL663109.1-201ENST00000411498 844 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.5□□□□□ -1.69
CNOT3O75175 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 CENPIP1-201ENST00000425713 902 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 IPMKP1-201ENST00000425988 855 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 C8orf59P1-201ENST00000429930 303 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.5□□□□□ -1.69
CNOT3O75175 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.5□□□□□ -1.69
CNOT3O75175 BX248409.1-201ENST00000455497 255 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.5□□□□□ -1.69
CNOT3O75175 AL133244.1-201ENST00000456007 258 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.5□□□□□ -1.69
CNOT3O75175 RPL23AP2-201ENST00000471227 466 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 SETP11-201ENST00000473027 690 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNOT3O75175 AC112198.1-201ENST00000505369 1220 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AC093281.2-201ENST00000510153 597 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.5□□□□□ -1.69
CNOT3O75175 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.5□□□□□ -1.69
CNOT3O75175 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.5□□□□□ -1.69
CNOT3O75175 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.5□□□□□ -1.69
CNOT3O75175 AL110118.1-201ENST00000553543 400 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.5□□□□□ -1.69
CNOT3O75175 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
CNOT3O75175 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.5□□□□□ -1.69
CNOT3O75175 MTND6P33-201ENST00000571794 183 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AC022884.3-201ENST00000579571 248 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 NTAN1P1-201ENST00000603150 646 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AL139395.1-201ENST00000603662 160 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AC023158.2-201ENST00000614876 543 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AC015540.1-201ENST00000615828 501 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNOT3O75175 VPS35P1-201ENST00000563400 1518 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 AC096656.1-201ENST00000623826 1364 ntBASIC4.5□□□□□ -1.69
CNOT3O75175 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CNOT3O75175 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.49□□□□□ -1.69
CNOT3O75175 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNOT3O75175 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNOT3O75175 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CNOT3O75175 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.49□□□□□ -1.69
CNOT3O75175 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNOT3O75175 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNOT3O75175 Y_RNA.18-201ENST00000362461 102 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 RNA5SP502-201ENST00000362694 119 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 RNU1-83P-201ENST00000363426 164 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 SNORA70F-201ENST00000384142 135 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 RNU6-517P-201ENST00000384362 110 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 RNU1-82P-201ENST00000390851 165 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.49□□□□□ -1.69
CNOT3O75175 TPMTP3-201ENST00000411928 735 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 UBE2V1P10-201ENST00000414685 269 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 ELOCP17-201ENST00000414751 326 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.49□□□□□ -1.69
CNOT3O75175 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.49□□□□□ -1.69
CNOT3O75175 RPL21P110-201ENST00000433345 446 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.49□□□□□ -1.69
CNOT3O75175 RPS17P8-201ENST00000434525 335 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms