Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC093591.3-201ENST00000634516 308 ntBASIC6.15□□□□□ -1.42
GRIN3BO60391 MIR3688-2-201ENST00000636963 87 ntBASIC6.15□□□□□ -1.42
GRIN3BO60391 AC000095.2-202ENST00000637415 154 ntBASIC6.15□□□□□ -1.42
GRIN3BO60391 AC020633.1-201ENST00000468439 2247 ntBASIC6.15□□□□□ -1.43
GRIN3BO60391 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
GRIN3BO60391 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
GRIN3BO60391 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.15□□□□□ -1.43
GRIN3BO60391 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
GRIN3BO60391 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.15□□□□□ -1.43
GRIN3BO60391 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
GRIN3BO60391 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
GRIN3BO60391 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
GRIN3BO60391 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
GRIN3BO60391 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.14□□□□□ -1.43
GRIN3BO60391 Y_RNA.9-201ENST00000362354 101 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 SNORA62.3-201ENST00000365110 153 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 RNA5SP397-201ENST00000391323 118 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 RSU1P3-201ENST00000412878 835 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.14□□□□□ -1.43
GRIN3BO60391 AC008280.1-201ENST00000418851 412 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 OR10T1P-201ENST00000424327 947 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 AL356583.2-201ENST00000426536 280 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.14□□□□□ -1.43
GRIN3BO60391 RPL34P6-201ENST00000432390 345 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 CBX1P1-201ENST00000440184 427 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 MTND5P20-201ENST00000448677 143 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.14□□□□□ -1.43
GRIN3BO60391 NDUFA5P7-201ENST00000452914 242 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.14□□□□□ -1.43
GRIN3BO60391 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.14□□□□□ -1.43
GRIN3BO60391 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.14□□□□□ -1.43
GRIN3BO60391 MTCYBP17-201ENST00000503579 789 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.14□□□□□ -1.43
GRIN3BO60391 AC091912.1-201ENST00000511351 248 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.14□□□□□ -1.43
GRIN3BO60391 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.14□□□□□ -1.43
GRIN3BO60391 AF279873.1-201ENST00000523393 313 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.14□□□□□ -1.43
GRIN3BO60391 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.14□□□□□ -1.43
GRIN3BO60391 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.14□□□□□ -1.43
GRIN3BO60391 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.14□□□□□ -1.43
GRIN3BO60391 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.14□□□□□ -1.43
GRIN3BO60391 AP001506.1-201ENST00000615444 211 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 DUXAP9-208ENST00000622815 614 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 AC231657.1-201ENST00000624313 397 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
GRIN3BO60391 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.14□□□□□ -1.43
GRIN3BO60391 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
GRIN3BO60391 CASC19-204ENST00000641001 2055 ntBASIC6.14□□□□□ -1.43
GRIN3BO60391 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.14□□□□□ -1.43
GRIN3BO60391 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
GRIN3BO60391 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.14□□□□□ -1.43
GRIN3BO60391 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GRIN3BO60391 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 AC090017.1-201ENST00000548612 1779 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AC239868.2-201ENST00000564237 4527 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
GRIN3BO60391 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
GRIN3BO60391 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
GRIN3BO60391 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.13□□□□□ -1.43
GRIN3BO60391 RNU1-74P-201ENST00000384108 171 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 RPS26P8-201ENST00000393490 348 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 MTCYBP24-201ENST00000420387 1106 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AC233981.1-201ENST00000423224 461 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 ZYG11AP1-201ENST00000430329 837 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.13□□□□□ -1.43
GRIN3BO60391 HMGB1P31-201ENST00000437242 427 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 TCEA1P1-201ENST00000449716 880 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.13□□□□□ -1.43
GRIN3BO60391 AC010733.1-201ENST00000451515 401 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 TRGVB-201ENST00000453257 471 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 SEPT7P3-201ENST00000455017 621 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 RPS5P7-201ENST00000456664 608 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 snoU13.24-201ENST00000458998 104 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AC012123.2-201ENST00000485809 248 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 RPS17P5-201ENST00000498293 408 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AC117522.1-201ENST00000509821 380 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 MTCO2P4-201ENST00000517968 247 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AC136777.2-201ENST00000522979 358 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 OR5M7P-201ENST00000526140 972 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AP001646.1-201ENST00000527936 915 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.13□□□□□ -1.43
GRIN3BO60391 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms