Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC006566.1-201ENST00000608943 513 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AL589743.7-201ENST00000612637 233 ntBASIC4.77□□□□□ -1.65
PROM1O43490 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 AC015914.2-201ENST00000618167 288 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AL731566.2-201ENST00000618971 317 ntBASIC4.77□□□□□ -1.65
PROM1O43490 BX005214.3-202ENST00000619809 325 ntBASIC4.77□□□□□ -1.65
PROM1O43490 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.77□□□□□ -1.65
PROM1O43490 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 AP001273.1-201ENST00000624493 3152 ntBASIC4.77□□□□□ -1.65
PROM1O43490 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PROM1O43490 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.76□□□□□ -1.65
PROM1O43490 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
PROM1O43490 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 RNU6-867P-201ENST00000364956 107 ntBASIC4.76□□□□□ -1.65
PROM1O43490 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PROM1O43490 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 MTCO3P31-201ENST00000405526 789 ntBASIC4.76□□□□□ -1.65
PROM1O43490 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.76□□□□□ -1.65
PROM1O43490 MIR548F1-201ENST00000408667 84 ntBASIC4.76□□□□□ -1.65
PROM1O43490 DBF4P1-201ENST00000412976 1892 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.76□□□□□ -1.65
PROM1O43490 AC093162.1-201ENST00000419682 124 ntBASIC4.76□□□□□ -1.65
PROM1O43490 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.76□□□□□ -1.65
PROM1O43490 MTCO3P1-205ENST00000422088 832 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.76□□□□□ -1.65
PROM1O43490 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 AL365184.2-201ENST00000431139 435 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 AL596276.1-201ENST00000434465 418 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.76□□□□□ -1.65
PROM1O43490 RPS29P9-201ENST00000440360 171 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AL450023.3-201ENST00000440592 271 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 CEACAMP9-201ENST00000442990 513 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 EEF1A1P1-201ENST00000447052 739 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.76□□□□□ -1.65
PROM1O43490 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 AC027673.1-201ENST00000456245 405 ntBASIC4.76□□□□□ -1.65
PROM1O43490 OR9M1P-201ENST00000459641 921 ntBASIC4.76□□□□□ -1.65
PROM1O43490 RPS29P22-201ENST00000472363 168 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AC126182.1-201ENST00000478134 357 ntBASIC4.76□□□□□ -1.65
PROM1O43490 RN7SL244P-201ENST00000493405 297 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 AC010350.1-201ENST00000504908 231 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AC135352.1-201ENST00000506173 1418 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.76□□□□□ -1.65
PROM1O43490 HMGB1P28-201ENST00000507778 552 ntBASIC4.76□□□□□ -1.65
PROM1O43490 RNU6-1261P-201ENST00000517194 104 ntBASIC4.76□□□□□ -1.65
PROM1O43490 SLC2A13P1-201ENST00000531560 322 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 GSTP1P1-201ENST00000548078 319 ntBASIC4.76□□□□□ -1.65
PROM1O43490 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
PROM1O43490 TRAV15-201ENST00000556680 249 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 AC011840.5-201ENST00000582125 771 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.76□□□□□ -1.65
PROM1O43490 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.76□□□□□ -1.65
PROM1O43490 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.76□□□□□ -1.65
PROM1O43490 AC015871.2-201ENST00000603605 948 ntBASIC4.76□□□□□ -1.65
PROM1O43490 SEPT7P9-203ENST00000604116 343 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AL354760.1-201ENST00000608357 643 ntBASIC4.76□□□□□ -1.65
PROM1O43490 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 AL356596.1-201ENST00000624230 379 ntBASIC4.76□□□□□ -1.65
PROM1O43490 AL603839.4-201ENST00000624658 1005 ntBASIC4.76□□□□□ -1.65
PROM1O43490 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.76□□□□□ -1.65
PROM1O43490 BMS1P21-201ENST00000634565 365 ntBASIC4.76□□□□□ -1.65
PROM1O43490 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.76□□□□□ -1.65
PROM1O43490 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PROM1O43490 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PROM1O43490 CASC19-204ENST00000641001 2055 ntBASIC4.76□□□□□ -1.65
PROM1O43490 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PROM1O43490 TEX21P-201ENST00000447107 1476 ntBASIC4.75□□□□□ -1.65
PROM1O43490 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PROM1O43490 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.75□□□□□ -1.65
PROM1O43490 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PROM1O43490 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.75□□□□□ -1.65
PROM1O43490 Y_RNA.25-201ENST00000362528 102 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms