Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX39AO00148 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
DDX39AO00148 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
DDX39AO00148 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
DDX39AO00148 RNU6-1151P-201ENST00000384684 107 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX39AO00148 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX39AO00148 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX39AO00148 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 AC011742.1-201ENST00000431448 434 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX39AO00148 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX39AO00148 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX39AO00148 RPS20P32-201ENST00000456044 356 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 AL133162.1-201ENST00000463228 453 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.26□□□□□ -1.73
DDX39AO00148 RPL5P23-201ENST00000496040 868 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX39AO00148 TMEM248P1-201ENST00000510579 951 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 MTND2P31-201ENST00000512602 616 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 HIGD1AP3-201ENST00000515857 278 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 RNU6-488P-201ENST00000515918 99 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 RNU6-202P-201ENST00000515998 96 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 IGHV3-32-201ENST00000519182 355 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX39AO00148 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.26□□□□□ -1.73
DDX39AO00148 EIF5A2P1-201ENST00000564027 460 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 MTCYBP28-201ENST00000566728 1132 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 YWHAQP7-201ENST00000603536 658 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 AL356094.1-201ENST00000624663 1212 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 AL356118.1-201ENST00000635272 1078 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 UBE3AP2-201ENST00000429033 2259 ntBASIC4.26□□□□□ -1.73
DDX39AO00148 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
DDX39AO00148 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.26□□□□□ -1.73
DDX39AO00148 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
DDX39AO00148 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX39AO00148 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX39AO00148 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
DDX39AO00148 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX39AO00148 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX39AO00148 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX39AO00148 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
DDX39AO00148 SNORA73.2-201ENST00000364946 201 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 RHOT1P2-201ENST00000366423 333 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX39AO00148 MIR3074-201ENST00000384885 81 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 AL355379.1-201ENST00000405542 640 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 RNU6-77P-201ENST00000410554 91 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX39AO00148 AL390879.2-203ENST00000426943 1121 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 MTATP6P11-201ENST00000428071 670 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX39AO00148 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX39AO00148 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX39AO00148 AL590399.6-201ENST00000446396 307 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 HMGN2P21-201ENST00000447764 270 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 UBDP1-202ENST00000457888 382 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 RPS27P23-201ENST00000487608 251 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 AP002812.1-201ENST00000495378 474 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX39AO00148 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX39AO00148 AC090877.1-201ENST00000561418 344 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX39AO00148 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX39AO00148 VN1R79P-201ENST00000593540 513 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.25□□□□□ -1.73
DDX39AO00148 AC097372.4-201ENST00000625025 466 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX39AO00148 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
DDX39AO00148 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX39AO00148 SAGE4P-201ENST00000442271 3381 ntBASIC4.25□□□□□ -1.73
DDX39AO00148 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
DDX39AO00148 AC073055.1-201ENST00000456901 1621 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX39AO00148 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX39AO00148 IPO8P1-201ENST00000455509 3109 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX39AO00148 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX39AO00148 RNU6-1243P-201ENST00000364028 107 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
DDX39AO00148 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX39AO00148 AC007066.1-201ENST00000392902 381 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
DDX39AO00148 PTGES3P2-201ENST00000407942 482 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 AL035423.1-201ENST00000420331 213 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 RPL7P53-201ENST00000421245 739 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX39AO00148 AL389915.1-201ENST00000422463 466 ntBASIC4.24□□□□□ -1.73
DDX39AO00148 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX39AO00148 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX39AO00148 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX39AO00148 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms