Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC007458.1-201ENST00000542812 373 ntBASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC083899.3-201ENST00000603413 594 ntBASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 OR10AB1P-202ENST00000641219 1686 ntBASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC110792.3-201ENST00000595906 1614 ntBASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AL513302.2-201ENST00000562313 1842 ntBASIC2.75□□□□□ -1.97
TCRBV4S1A1TA0A5B7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AL136964.1-201ENST00000622038 2990 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 FRG1CP-201ENST00000358464 769 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 RNU4-35P-201ENST00000362588 141 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 RNA5SP267-201ENST00000364893 126 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 OR52E6-202ENST00000379946 954 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 U3.19-201ENST00000390893 196 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 SKINT1L-201ENST00000401057 817 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 RNA5SP31-201ENST00000411144 127 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC069218.2-201ENST00000411665 344 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 DBIP2-201ENST00000419076 262 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 GLRXP1-201ENST00000423261 334 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 FAR1P1-201ENST00000427163 934 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 USP9YP31-201ENST00000431405 881 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 HMGB3P21-201ENST00000452483 547 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 HMGN2P7-201ENST00000456186 273 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC021205.2-201ENST00000480069 347 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC073522.1-201ENST00000483312 377 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 HMGB1P21-201ENST00000502313 581 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC004024.1-201ENST00000549244 247 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AL845331.3-202ENST00000562856 261 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 MIR5195-201ENST00000583555 115 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC006254.3-201ENST00000603353 884 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 MIR8058-201ENST00000615737 89 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 C2orf27A-204ENST00000623058 969 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC007496.3-201ENST00000624987 3443 ntBASIC2.74□□□□□ -1.97
TCRBV4S1A1TA0A5B7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC017079.2-201ENST00000416102 485 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 RPS12P23-201ENST00000419579 400 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC093084.1-201ENST00000424233 687 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC005019.1-201ENST00000436455 431 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC069277.2-201ENST00000454211 432 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC007967.1-201ENST00000455422 1159 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 HMGN1P18-201ENST00000457642 277 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 RPL23AP62-201ENST00000463396 453 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 RPL9P32-201ENST00000464118 620 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 HSPD1P15-201ENST00000505573 1122 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 TXNP6-201ENST00000510190 310 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC037471.2-201ENST00000564941 598 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AL031985.2-201ENST00000600955 480 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC006557.5-201ENST00000603126 811 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC011816.2-201ENST00000607089 556 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 AC091953.5-201ENST00000622919 233 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TCRBV4S1A1TA0A5B7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 266.2 ms