Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 VN1R40P-201ENST00000455196 941 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RN7SL271P-201ENST00000487601 295 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 MTND5P21-201ENST00000531961 522 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 BPTFP1-201ENST00000579209 492 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC008687.2-201ENST00000597865 520 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC011492.1-201ENST00000600023 315 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC099785.1-201ENST00000605697 437 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RNU4-89P-201ENST00000607443 133 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AL512427.1-201ENST00000618593 349 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AL049777.1-201ENST00000622740 518 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 MAPK10-253ENST00000641010 4072 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AL122126.1-201ENST00000546905 1318 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 RLIMP1-201ENST00000339626 1680 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 MIR372-201ENST00000362225 67 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 U3.15-201ENST00000365398 212 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 SNORA57.1-201ENST00000391227 145 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 PAICSP7-201ENST00000419829 962 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 RPS7P2-201ENST00000435134 607 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AL132838.2-201ENST00000492041 314 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC012170.1-201ENST00000495139 359 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 RPL31P61-201ENST00000496160 376 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC093801.2-201ENST00000503966 1050 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC026414.1-201ENST00000504046 698 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 RNU6-416P-201ENST00000516265 103 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 RN7SKP277-201ENST00000516895 283 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 OR8L1P-201ENST00000534005 955 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC084824.1-201ENST00000550917 1005 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC004217.3-201ENST00000551552 878 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 BNIP3P27-201ENST00000599991 412 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 VN1R85P-201ENST00000601587 426 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AP000255.1-201ENST00000610276 676 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC105227.2-201ENST00000615075 605 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 AC007275.1-201ENST00000621243 671 ntBASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4BQ9Y4P1 SGO1P1-201ENST00000603525 1447 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 CASC19-261ENST00000641853 1638 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 DCAF13P1-201ENST00000495256 1330 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AL627171.1-201ENST00000618845 1308 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 MTCO1P24-201ENST00000515438 1558 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC016716.1-201ENST00000265882 708 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 MIR124-3-201ENST00000384866 87 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 MIR16-1-201ENST00000385271 89 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 RNU6-1000P-201ENST00000391066 106 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 DSTNP4-201ENST00000399472 474 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 RPL21P65-201ENST00000406094 466 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms