Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 MTCO1P11-201ENST00000429111 1528 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 RNU6-354P-201ENST00000383862 107 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 RNA5SP87-201ENST00000384155 118 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 RNU6-610P-201ENST00000384264 107 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 NRBF2P2-201ENST00000413087 861 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 MTCYBP24-201ENST00000420387 1106 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC246680.2-201ENST00000422106 389 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 MTCO2P1-201ENST00000424648 477 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL512637.2-201ENST00000431287 1256 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 RPL12P3-201ENST00000440080 396 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 TPT1P3-201ENST00000492841 512 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC005726.1-201ENST00000494679 427 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 RNU6-334P-201ENST00000517072 102 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 CR383656.14-201ENST00000551951 406 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC093510.2-201ENST00000562820 896 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 BPTFP1-201ENST00000579209 492 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC090616.5-202ENST00000582111 297 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC022069.1-201ENST00000582910 658 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC092474.3-201ENST00000603022 568 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC105227.2-201ENST00000615075 605 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AC005183.1-201ENST00000603687 1979 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL157700.1-201ENST00000561973 1432 ntBASIC3.27□□□□□ -1.89
KCNIP3Q9Y2W7 AL133383.2-201ENST00000622958 2336 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 MIR184-201ENST00000384962 84 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 MIR16-1-201ENST00000385271 89 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 RPL22P22-201ENST00000395439 379 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 MIR1250-201ENST00000408098 113 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 RNU2-37P-201ENST00000410695 177 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC017079.2-201ENST00000416102 485 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 GTF3AP1-201ENST00000416942 1004 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 RPL31P12-201ENST00000422587 358 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 DEFB130D-201ENST00000426866 237 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AL627308.1-201ENST00000435693 821 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 RPS4XP4-201ENST00000443195 763 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AL096829.2-201ENST00000446582 742 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AL050341.1-201ENST00000447743 313 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 OR51B8P-201ENST00000449892 769 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 MTND2P28-201ENST00000457540 1044 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 RN7SL354P-201ENST00000469282 294 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 RN7SL691P-201ENST00000494487 301 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC026784.1-201ENST00000507986 352 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC005921.1-201ENST00000510589 286 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC008958.1-201ENST00000511047 682 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC099522.1-202ENST00000514718 367 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC104057.1-201ENST00000515547 497 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 UBE2NP1-201ENST00000545592 458 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 MIR4789-201ENST00000577469 82 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 OR4G1P-201ENST00000588632 938 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AL020997.3-201ENST00000602843 359 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC018816.2-201ENST00000621460 353 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC093875.1-201ENST00000623688 504 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms