Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AL389925.1-201ENST00000432257 728 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 RPL35AP22-201ENST00000436855 335 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AL353803.3-201ENST00000444641 335 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC092421.1-201ENST00000448148 418 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC012175.1-201ENST00000603755 531 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 HSPE1P14-201ENST00000605812 302 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC091768.1-201ENST00000609258 930 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AL049794.2-201ENST00000616301 365 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 MIR4679-1-201ENST00000637619 75 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AL356585.10-201ENST00000641883 123 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC007938.1-201ENST00000562524 2902 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AL109809.4-201ENST00000603520 2185 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 RNA5SP114-201ENST00000363780 113 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 RN7SKP257-201ENST00000364525 309 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 RNY4P28-201ENST00000365281 93 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 DBIP1-201ENST00000401435 260 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC134879.1-201ENST00000426062 394 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AP000942.1-201ENST00000463969 747 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 RN7SL259P-201ENST00000478499 253 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 MIR4300-201ENST00000581016 96 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 MIR4273-201ENST00000582824 84 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 MIR3159-201ENST00000584572 74 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 RPL23AP92-201ENST00000603609 255 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC092960.1-201ENST00000604762 351 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC108706.1-201ENST00000611053 297 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AL161420.1-201ENST00000619393 264 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC131009.3-201ENST00000621809 287 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AL136313.1-201ENST00000624804 202 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 CYP3A51P-201ENST00000633513 256 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC107081.3-201ENST00000612715 2034 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AC009120.2-204ENST00000621548 2032 ntBASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS9D1Q9Y2B5 AL137058.3-201ENST00000624531 3099 ntBASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
VPS9D1Q9Y2B5 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms