Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 RNA5SP51-201ENST00000364750 119 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 SNORD6-201ENST00000365444 73 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 HMGB1P10-201ENST00000395823 563 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 HSPE1P8-201ENST00000406997 288 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AL353692.2-201ENST00000407054 335 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 MTCO3P43-201ENST00000440974 771 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC017099.1-201ENST00000448261 1028 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 DNAJC19P1-201ENST00000455312 319 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 NIPA2P2-201ENST00000496376 1083 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC104619.4-201ENST00000510773 249 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC010285.3-201ENST00000511668 676 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 MTND2P31-201ENST00000512602 616 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 RN7SKP157-201ENST00000516174 282 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 SNORA31.13-201ENST00000516624 135 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 RN7SKP82-201ENST00000516786 223 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 OR4A2P-201ENST00000527276 913 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC092747.2-201ENST00000545069 983 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC233266.2-201ENST00000567067 528 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC067852.4-201ENST00000590314 478 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 U7.8-201ENST00000619968 63 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 DCAF13P3-201ENST00000561147 1334 ntBASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC019070.1-201ENST00000415008 1024 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC114814.2-201ENST00000419195 485 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AL451062.2-201ENST00000427515 271 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC017083.1-201ENST00000428093 483 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 MTND2P8-201ENST00000450555 1025 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 HMGN2P7-201ENST00000456186 273 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC091153.1-201ENST00000466297 402 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC024220.1-201ENST00000603675 484 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AL390816.3-201ENST00000604527 1066 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AL137849.1-201ENST00000604767 169 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC010680.4-201ENST00000605334 543 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC091905.1-201ENST00000624400 311 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC119674.1-207ENST00000641355 633 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 AC009093.8-201ENST00000641769 292 ntBASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLIP2Q9UDT6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AP001486.2-201ENST00000561652 5113 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 METTL21EP-201ENST00000298105 713 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 MIR124-3-201ENST00000384866 87 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 HLFP1-201ENST00000402375 499 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 RNU2-17P-201ENST00000410290 190 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AC093578.1-201ENST00000415219 368 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 LINC01881-201ENST00000416103 412 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 RPL21P109-201ENST00000422213 475 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AL031736.2-201ENST00000426573 787 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 SKP1P1-201ENST00000438081 489 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AL691517.1-201ENST00000440833 1235 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AL513321.1-201ENST00000441175 761 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 HMGB1P21-201ENST00000502313 581 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 SNRPGP1-201ENST00000553864 222 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 OR4U1P-201ENST00000554958 912 ntBASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP2Q9UDT6 AC008739.3-201ENST00000603262 127 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms