Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
DKK3Q9UBP4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DKK3Q9UBP4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
DKK3Q9UBP4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DKK3Q9UBP4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 U3.4-201ENST00000363352 213 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 RNA5SP28-201ENST00000363841 119 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 U3.30-201ENST00000391308 210 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL161909.1-201ENST00000397390 712 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL590290.1-201ENST00000405336 380 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 RNU2-16P-201ENST00000410712 136 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 RAD23BP2-201ENST00000416003 1207 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 NRBF2P3-201ENST00000432731 865 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC092162.1-201ENST00000432828 434 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 MTND1P30-201ENST00000441241 901 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 RPS7P5-201ENST00000441482 581 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 COX6CP18-201ENST00000448769 222 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 RNU6-956P-201ENST00000458868 103 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC011005.3-201ENST00000491624 395 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 SCARNA22-201ENST00000503991 125 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 IGBP1P5-201ENST00000507524 1000 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 ATP1B1P1-201ENST00000509767 915 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC079140.3-201ENST00000511111 550 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 RNA5SP135-201ENST00000517019 125 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 DEFB109D-201ENST00000529497 240 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC084757.1-201ENST00000559987 490 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 GTF2IP8-201ENST00000560687 584 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 EIF1P4-201ENST00000572664 335 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 ROCK1P1-201ENST00000573767 549 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 MTATP6P3-201ENST00000581686 676 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC107982.3-201ENST00000584957 985 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC022726.1-201ENST00000587475 207 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC008507.1-201ENST00000587506 734 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL139286.1-201ENST00000604465 483 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC006270.3-201ENST00000605967 1036 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC100793.4-201ENST00000613683 429 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AL031667.3-201ENST00000620124 655 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 AC099063.3-201ENST00000642066 185 ntBASIC4.88□□□□□ -1.63
DKK3Q9UBP4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.88□□□□□ -1.63
DKK3Q9UBP4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RNA5SP191-201ENST00000362585 102 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RNVU1-6-201ENST00000364688 164 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 OR52E6-202ENST00000379946 954 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RNU6-1300P-201ENST00000391046 108 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RN7SKP27-201ENST00000410684 333 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RPL7P8-201ENST00000411964 730 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 BX510359.2-201ENST00000417920 305 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RPL17P36-201ENST00000420302 549 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 LINC00993-201ENST00000420453 540 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RWDD4P2-201ENST00000426392 563 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 RPS6P12-201ENST00000432491 726 ntBASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.87□□□□□ -1.63
DKK3Q9UBP4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms