Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC121334.2-201ENST00000605387 271 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 HSPE1P14-201ENST00000605812 302 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AP001521.2-201ENST00000608772 546 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AL133215.3-201ENST00000609801 448 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC090971.5-201ENST00000621102 293 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AL133216.2-202ENST00000634512 349 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC010325.3-201ENST00000641084 394 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 PARP4P2-201ENST00000446672 3326 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC100757.1-201ENST00000616872 1835 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 RNU6-254P-201ENST00000363377 107 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 RNU6-853P-201ENST00000364306 107 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 Y_RNA.255-201ENST00000364581 97 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 SNORA4.3-201ENST00000365564 137 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 SNORA64.3-201ENST00000365647 134 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 Y_RNA.384-201ENST00000383909 102 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 Y_RNA.387-201ENST00000383918 102 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC016769.3-201ENST00000396562 315 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 PRRC2CP1-201ENST00000404428 159 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC099782.1-201ENST00000425889 474 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 RPL7AP49-201ENST00000429522 581 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AL591438.1-201ENST00000433508 581 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 GPR143P-201ENST00000434155 205 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC236972.2-201ENST00000434979 310 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC104651.2-201ENST00000447549 528 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 MRPS17P3-201ENST00000465453 385 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AL049874.2-201ENST00000492636 288 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC034222.1-201ENST00000494052 532 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC022861.1-201ENST00000522981 663 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC068831.4-201ENST00000556118 109 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC009852.2-201ENST00000567898 485 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 AL356432.3-201ENST00000568952 465 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 AC010591.1-201ENST00000603941 649 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 FAM27E2-201ENST00000619668 403 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 MIR6829-201ENST00000620375 67 ntBASIC5.62□□□□□ -1.51
SSU72Q9NP77 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.62□□□□□ -1.51
SSU72Q9NP77 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSU72Q9NP77 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 MIR369-201ENST00000362155 70 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 Y_RNA.259-201ENST00000364619 101 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms