Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 Z80107.2-201ENST00000445127 392 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC079776.3-201ENST00000450665 370 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC097484.1-201ENST00000471148 389 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 RPL23AP37-201ENST00000479658 549 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC107398.1-201ENST00000486904 505 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 ARL2BPP6-201ENST00000512757 439 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 HMGN1P9-201ENST00000515212 298 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC006960.3-201ENST00000561845 705 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 MIR4716-201ENST00000579628 84 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 SS18L2P2-201ENST00000583960 235 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD248Q9HCU0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD248Q9HCU0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD248Q9HCU0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CD248Q9HCU0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CD248Q9HCU0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CD248Q9HCU0 Z95331.1-201ENST00000623075 23112 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD248Q9HCU0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD248Q9HCU0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD248Q9HCU0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD248Q9HCU0 RNU6-532P-201ENST00000384318 107 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 MIR142-201ENST00000384835 87 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 MT-TD-201ENST00000387419 68 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 SNORA48.4-201ENST00000391089 134 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD248Q9HCU0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 MIR1182-201ENST00000408363 97 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 RN7SKP56-201ENST00000410513 331 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 RPL21P32-201ENST00000419877 477 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 ARL5AP2-201ENST00000444698 533 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 CYCSP24-201ENST00000445119 316 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 GDI2P2-201ENST00000445131 608 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 GEMIN8P3-201ENST00000445417 720 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 BTF3P6-201ENST00000448054 499 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 RNU7-27P-201ENST00000459281 62 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 RPS3AP41-201ENST00000462701 778 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 MTND1P16-201ENST00000465177 898 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC069439.1-201ENST00000494739 167 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC005912.1-201ENST00000495392 255 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC024589.1-201ENST00000512207 263 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 SCARNA20.4-201ENST00000516969 131 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 HMGB1P19-201ENST00000517578 577 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AP002453.2-201ENST00000533503 320 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC123904.3-201ENST00000547218 814 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC091489.2-201ENST00000566263 604 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 MIR4480-201ENST00000582492 71 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 AP001836.1-201ENST00000604675 523 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC087783.2-201ENST00000605070 562 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC093799.2-201ENST00000610062 578 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC055764.2-201ENST00000610089 670 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AL353726.1-201ENST00000614041 1000 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC069209.1-201ENST00000619282 651 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AC091953.3-201ENST00000623220 236 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 FAM157B-203ENST00000639350 358 ntBASIC5.33□□□□□ -1.56
CD248Q9HCU0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.33□□□□□ -1.56
CD248Q9HCU0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD248Q9HCU0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD248Q9HCU0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms