Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MIR331-201ENST00000362302 94 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 RNU1-132P-201ENST00000364300 164 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC104297.1-201ENST00000393779 870 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 RN7SKP27-201ENST00000410684 333 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC246680.2-201ENST00000422106 389 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 MTND1P32-201ENST00000433043 938 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 TMX2P1-201ENST00000436507 708 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AL353572.1-201ENST00000442490 417 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC104651.2-201ENST00000447549 528 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC114755.5-201ENST00000447760 831 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 PSMC1P13-201ENST00000458195 985 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 RPS27AP17-201ENST00000463344 455 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC041039.1-201ENST00000485656 536 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC010424.1-201ENST00000506336 297 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC090616.2-202ENST00000584248 222 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC106791.2-201ENST00000604680 391 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC113403.1-201ENST00000604910 193 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AL139286.2-201ENST00000606838 396 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AL357078.3-201ENST00000607528 618 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AL135786.2-201ENST00000608422 615 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC122133.1-201ENST00000613964 233 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC109454.4-201ENST00000623411 649 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC007494.3-201ENST00000624660 743 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 MIR3653-201ENST00000625572 110 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC111188.2-201ENST00000529697 1387 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC073055.1-201ENST00000456901 1621 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AL355852.1-201ENST00000454081 1771 ntBASIC4.6□□□□□ -1.67
EBF3Q9H4W6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 MFSD8-242ENST00000641690 4199 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AP000357.1-201ENST00000409926 1165 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 Z75741.2-201ENST00000417272 1167 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 EIF2AP4-201ENST00000424793 1781 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC092170.1-201ENST00000440211 356 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 RPL7L1P1-201ENST00000448259 785 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 NPM1P39-201ENST00000449818 867 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC012671.1-201ENST00000451912 203 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 RPL5P30-201ENST00000465511 891 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC069528.1-202ENST00000482888 637 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC008549.1-201ENST00000512900 643 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC060788.1-201ENST00000521318 469 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AP003730.1-201ENST00000524605 285 ntBASIC4.59□□□□□ -1.67
EBF3Q9H4W6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.59□□□□□ -1.67
EBF3Q9H4W6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms