Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RNU1-14P-201ENST00000362759 152 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RNU6-251P-201ENST00000363235 104 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RNU5B-1-201ENST00000363286 116 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AC068538.1-201ENST00000376856 336 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RNU6-730P-201ENST00000383954 104 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AC009237.10-201ENST00000414112 510 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RPS3AP54-201ENST00000435535 734 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RPL23AP52-201ENST00000439311 478 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AL162151.2-201ENST00000448875 158 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RN7SL860P-201ENST00000473738 223 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AC078785.3-201ENST00000476607 425 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AL024509.2-201ENST00000493462 493 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RN7SL691P-201ENST00000494487 301 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 MTCO2P32-201ENST00000514865 403 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 RNU6-1073P-201ENST00000517182 106 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 PHBP17-201ENST00000528576 541 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AC006064.5-201ENST00000541782 248 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AL109766.1-201ENST00000555080 552 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 GAS5-AS1-201ENST00000602767 694 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AL445567.2-201ENST00000618935 498 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 MIR6810-201ENST00000622701 70 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AC019278.1-201ENST00000623516 479 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 OR52H1-202ENST00000641796 1061 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 AC105074.1-201ENST00000623380 3095 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC126755.2-208ENST00000327792 462 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC138969.1-213ENST00000331436 462 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 MIR383-201ENST00000362257 73 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 SNORA70C-201ENST00000384538 135 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 RPS26P8-201ENST00000393490 348 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 MIR1179-201ENST00000408703 91 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 ARF4P4-201ENST00000439608 520 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 NUTF2P3-201ENST00000448540 384 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 RPL23AP2-201ENST00000471227 466 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC105137.1-201ENST00000484355 562 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC093267.1-201ENST00000489176 961 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 MTCO3P27-201ENST00000514397 196 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 RNA5SP49-201ENST00000516450 115 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 MED28P5-201ENST00000528254 438 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 MIR3939-201ENST00000582614 106 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC025588.3-201ENST00000604182 274 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AP003973.1-201ENST00000604639 691 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC139713.2-210ENST00000641741 992 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AC005261.4-201ENST00000600047 1385 ntBASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4AQ9BY43 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 RNU1-20P-201ENST00000363314 162 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 PTMAP5-201ENST00000393073 333 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 MTND4LP20-201ENST00000402379 270 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 OR8G2P-201ENST00000412796 908 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 BTF3P10-201ENST00000433415 495 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 RPL23AP46-201ENST00000438548 490 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 snoU13.24-201ENST00000458998 104 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms