Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC85AQ96PX6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC85AQ96PX6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC85AQ96PX6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC85AQ96PX6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 DNM1P47-203ENST00000571780 12667 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC239868.2-201ENST00000564237 4527 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 RPL23AP57-201ENST00000332361 466 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 RNA5SP326-201ENST00000363209 110 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 SNORA63C-201ENST00000364578 129 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 Y_RNA.381-201ENST00000365666 102 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 BTBD10P2-201ENST00000404779 676 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 RNU4-34P-201ENST00000410431 124 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC096921.1-201ENST00000411661 375 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 MTND3P2-201ENST00000438452 342 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 RN7SL808P-201ENST00000496066 299 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 FTH1P8-201ENST00000498161 514 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 RNU6-488P-201ENST00000515918 99 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 RN7SKP13-201ENST00000515933 244 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC023050.3-201ENST00000541142 333 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC093249.1-201ENST00000567049 203 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC090312.1-201ENST00000580637 348 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC017100.2-201ENST00000584628 355 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 RPL26P30-202ENST00000602923 645 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC010591.1-201ENST00000603941 649 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC115621.1-201ENST00000604653 858 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 MIR6837-201ENST00000620884 64 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AL592429.1-201ENST00000403909 1473 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 AC087516.1-201ENST00000561236 2428 ntBASIC6.95□□□□□ -1.3
CCDC85AQ96PX6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AC092162.3-201ENST00000624511 1624 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AL353796.1-201ENST00000561542 3241 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AL591135.1-201ENST00000401578 5914 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 RNU6-254P-201ENST00000363377 107 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 SNORA74A-201ENST00000364089 198 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 SNORA4.3-201ENST00000365564 137 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 RNU6-1158P-201ENST00000391167 107 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 SNORA75.4-201ENST00000391278 119 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AL139148.1-201ENST00000427122 680 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 CRIP1P1-201ENST00000427567 185 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 USP24P1-201ENST00000433802 779 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AC024082.2-201ENST00000434771 238 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 IFNA20P-201ENST00000436840 528 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AL031663.1-201ENST00000437445 219 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 CBX1P4-201ENST00000439415 457 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 BNIP3P2-201ENST00000441221 577 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AC004980.3-201ENST00000447046 365 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 BX842559.2-201ENST00000451418 605 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 RPL12P39-201ENST00000455456 496 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AC010301.1-201ENST00000473936 355 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 CR383656.1-201ENST00000484916 377 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 COX6CP8-201ENST00000522620 226 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AP003072.2-201ENST00000527756 676 ntBASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC85AQ96PX6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms