Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC7Q96M83 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC7Q96M83 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CCDC7Q96M83 AC122134.1-201ENST00000565664 1104 ntBASIC4.71□□□□□ -1.66
CCDC7Q96M83 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC7Q96M83 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC7Q96M83 AC135507.2-201ENST00000612443 309 ntBASIC4.71□□□□□ -1.66
CCDC7Q96M83 U7.8-201ENST00000619968 63 ntBASIC4.71□□□□□ -1.66
CCDC7Q96M83 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC7Q96M83 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC7Q96M83 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC7Q96M83 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 RNA5SP229-201ENST00000410809 99 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 RNA5SP31-201ENST00000411144 127 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC7Q96M83 AL513174.1-201ENST00000423182 629 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 AC004801.2-202ENST00000463559 283 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 AC010401.1-201ENST00000463867 348 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 AC104629.2-201ENST00000468627 598 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 LARP7P4-201ENST00000481075 878 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 RN7SKP289-201ENST00000517244 295 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 SCARNA20.6-201ENST00000517251 106 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 AP001636.2-201ENST00000525517 696 ntBASIC4.7□□□□□ -1.66
CCDC7Q96M83 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC7Q96M83 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC7Q96M83 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC7Q96M83 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC7Q96M83 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC7Q96M83 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC7Q96M83 MIR7-1-201ENST00000384871 110 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 SNORD65-201ENST00000391079 73 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 RPL5P19-201ENST00000404228 893 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 RPL23AP48-201ENST00000406913 488 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC7Q96M83 BX679664.1-201ENST00000434429 253 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 AC008264.1-201ENST00000447612 367 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 RPL37P3-201ENST00000456825 293 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 AC107934.2-201ENST00000518653 310 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 AC090136.1-201ENST00000520009 240 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC7Q96M83 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC7Q96M83 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC7Q96M83 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC7Q96M83 MIR4513-201ENST00000581077 86 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC7Q96M83 HMGB1P51-201ENST00000605166 638 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 AL034351.1-201ENST00000605288 668 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 AC110801.1-201ENST00000623590 212 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC7Q96M83 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC7Q96M83 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CCDC7Q96M83 AL356489.2-201ENST00000566968 3528 ntBASIC4.69□□□□□ -1.66
CCDC7Q96M83 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC7Q96M83 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC7Q96M83 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC7Q96M83 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC7Q96M83 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 ARL5AP3-201ENST00000439327 386 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 ATP5C1P1-201ENST00000441945 895 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 AC069277.2-201ENST00000454211 432 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 HSPE1P22-201ENST00000456856 327 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 RPL7P47-201ENST00000497299 556 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 RN7SKP60-201ENST00000516985 239 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 AC104997.1-201ENST00000519761 717 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 OR4R3P-201ENST00000525084 838 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 AC024224.1-201ENST00000538284 609 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 MIR5004-201ENST00000579078 107 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 AC006840.1-201ENST00000623069 542 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC7Q96M83 AL606537.1-201ENST00000607258 2011 ntBASIC4.68□□□□□ -1.66
CCDC7Q96M83 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC7Q96M83 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC7Q96M83 AC118273.1-201ENST00000525324 3006 ntBASIC4.67□□□□□ -1.66
CCDC7Q96M83 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC7Q96M83 RANP4-201ENST00000413361 655 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms