Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC096921.2-201ENST00000561507 1916 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC005225.5-201ENST00000623547 2225 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AC024587.1-201ENST00000505925 2157 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 DBF4P1-201ENST00000412976 1892 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AC005725.1-201ENST00000577346 2607 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 Y_RNA.80-201ENST00000362996 102 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 RNU6-200P-201ENST00000364743 107 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 RNU6-662P-201ENST00000384253 104 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 ATP5HP3-201ENST00000396994 486 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AL591416.1-201ENST00000404015 867 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 MIR548K-201ENST00000408406 116 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 RPL37P10-201ENST00000412884 288 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 OR51A3P-201ENST00000413596 924 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AL451074.5-201ENST00000415894 435 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 TMBIM7P-201ENST00000418074 855 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AC126120.1-201ENST00000431082 470 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 RPEP2-201ENST00000432149 701 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 EEF1B2P6-201ENST00000445713 673 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AL606490.1-201ENST00000452266 765 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 PRELID3BP1-201ENST00000457142 540 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 RNU6-1132P-201ENST00000459214 107 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 MRPS16P1-201ENST00000523462 412 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AC083923.1-201ENST00000523708 376 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AP001189.2-201ENST00000527320 189 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 EIF4A2P5-201ENST00000529914 499 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 OR10G5P-201ENST00000532733 358 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 MIR544B-201ENST00000582372 78 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 MIR6748-201ENST00000610433 71 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AC006157.1-201ENST00000611750 366 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 MIR7155-201ENST00000615925 56 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 FTX_2.1-201ENST00000618816 94 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 HDAC1P2-201ENST00000453661 1398 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 AP004289.2-201ENST00000444413 1457 ntBASIC6.92□□□□□ -1.3
TRIM47Q96LD4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM47Q96LD4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 Y_RNA.150-201ENST00000363562 102 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 RNU6-266P-201ENST00000364225 107 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 RN7SKP124-201ENST00000364730 341 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 RPS17P8-201ENST00000434525 335 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 PPIAP17-201ENST00000438507 471 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AL157827.1-201ENST00000447622 132 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 RPL18AP17-201ENST00000455326 198 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AC011225.1-201ENST00000457751 369 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 SLC25A51P1-201ENST00000468432 871 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms