Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 SNORD56.4-201ENST00000363883 71 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 NIPA2P1-201ENST00000426223 976 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 MOB1AP1-201ENST00000430903 535 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AL590762.3-201ENST00000436372 640 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 FABP5P3-201ENST00000437960 408 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC009263.1-201ENST00000441193 1239 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 PRELID3BP5-201ENST00000508612 460 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC008885.2-201ENST00000509506 930 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 RN7SKP21-201ENST00000516503 220 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 RN7SKP277-201ENST00000516895 283 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC135001.1-201ENST00000544546 283 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 TRAV15-201ENST00000556680 249 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC067959.1-201ENST00000604334 379 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC099676.1-201ENST00000608886 657 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC245100.7-201ENST00000609678 442 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC096586.1-201ENST00000610267 561 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 MIR6798-201ENST00000612887 67 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 MIR6810-201ENST00000622701 70 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AL732618.1-201ENST00000623251 301 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC092608.3-201ENST00000625017 386 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 OR6C71P-202ENST00000641886 1107 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 NSRP1P1-201ENST00000444067 1693 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 CR381670.1-201ENST00000624291 1693 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AL133412.1-201ENST00000380194 2992 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 PNPT1P2-201ENST00000456768 2050 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC016716.1-201ENST00000265882 708 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AL158050.1-201ENST00000416077 457 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC008173.1-201ENST00000418901 264 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 OR4F13P-201ENST00000428478 931 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 RPL7P4-203ENST00000430239 730 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 RPS29P7-201ENST00000439662 171 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 RPL23AP15-201ENST00000450202 459 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 PPIAP3-201ENST00000450588 505 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 UBDP1-202ENST00000457888 382 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 MTND3P24-201ENST00000506306 329 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 NPM1P41-201ENST00000512920 831 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC093853.1-201ENST00000515689 483 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC099489.2-201ENST00000574976 260 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 VN1R85P-201ENST00000601587 426 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 AC132825.7-201ENST00000638744 335 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 MTCO1P14-201ENST00000441695 1559 ntBASIC3.53□□□□□ -1.84
UBE2E3Q969T4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBE2E3Q969T4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
UBE2E3Q969T4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
UBE2E3Q969T4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms