Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC007342.7-201ENST00000624610 2337 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 RPS20P1-201ENST00000434853 354 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 HMGN2P7-201ENST00000456186 273 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 GTF3AP2-201ENST00000557014 266 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 MIR4769-201ENST00000584126 77 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC139713.2-210ENST00000641741 992 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 PNPT1P2-201ENST00000456768 2050 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 BMS1P22-201ENST00000414726 313 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC026523.2-201ENST00000625039 7739 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 SNORA7.4-201ENST00000384249 137 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC007899.1-201ENST00000412776 775 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 USP12PY-201ENST00000427677 1064 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 METTL15P1-201ENST00000481421 1045 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC021678.1-201ENST00000505195 936 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC022080.3-201ENST00000544433 482 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 CR383658.2-201ENST00000547576 1525 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 U3.12-201ENST00000364498 214 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AL159169.1-201ENST00000421119 127 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC092809.1-201ENST00000441469 474 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC067852.4-201ENST00000590314 478 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AL096803.3-201ENST00000609032 532 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 AC092628.2-201ENST00000622492 339 ntBASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ALMS1Q8TCU4 OR11H5P-202ENST00000641612 1325 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AC019155.1-201ENST00000382242 574 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 RPL21P112-201ENST00000434403 463 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 TOPORSLP1-201ENST00000467693 2102 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 RNA5SP42-201ENST00000364278 115 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 MTND6P18-201ENST00000439477 513 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 SUMO2P20-201ENST00000520803 283 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 PDCL2P2-201ENST00000533651 189 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AC022149.2-201ENST00000621061 203 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AC010149.2-201ENST00000637608 315 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AL133412.1-201ENST00000380194 2992 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 ASNSP3-201ENST00000451989 1306 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AC107015.1-201ENST00000466902 747 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 IGHV3-63-201ENST00000518422 341 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AL109741.3-201ENST00000561748 592 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AC068722.2-201ENST00000618734 544 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 RIOK3P1-201ENST00000418778 1528 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 AL450326.2-201ENST00000421913 1962 ntBASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ALMS1Q8TCU4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 RNU6-984P-201ENST00000363236 109 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 RNU1-89P-201ENST00000384592 164 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.21□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms