Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AL049737.1-201ENST00000413920 1403 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC068254.2-201ENST00000623938 3577 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 NOL8P1-201ENST00000508336 3529 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 RNA5SP502-201ENST00000362694 119 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 MIR1179-201ENST00000408703 91 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AL008987.1-201ENST00000415528 237 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 COX6CP15-201ENST00000426313 211 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AL158073.1-201ENST00000426848 1104 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 COX6B1P7-201ENST00000430845 235 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 RPL12P46-201ENST00000436610 195 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 RPL23AP46-201ENST00000438548 490 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC069285.2-201ENST00000440210 275 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC104306.1-201ENST00000449702 371 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AP001317.1-201ENST00000531194 960 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 TOMM20P2-201ENST00000540082 421 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC025884.1-201ENST00000556034 378 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC009094.1-201ENST00000564443 426 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 CYP4A43P-201ENST00000568156 121 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC008638.3-201ENST00000603341 463 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC069545.1-201ENST00000605671 358 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC092954.1-201ENST00000609121 445 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 TUSC7.1-201ENST00000610969 165 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC107075.1-201ENST00000613695 314 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 MIR492-201ENST00000638676 116 ntBASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH20Q8N6Y1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 RHOT1P2-201ENST00000366423 333 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 MIR93-201ENST00000385024 80 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AL161631.1-201ENST00000417933 486 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 PAICSP7-201ENST00000419829 962 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC007435.1-201ENST00000421086 415 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC009965.2-201ENST00000425328 970 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 DPRXP1-201ENST00000426312 460 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 MTCO1P54-201ENST00000430139 712 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC103987.1-201ENST00000473394 348 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 RPS29P19-201ENST00000479709 171 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 MTND2P14-201ENST00000482139 351 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 DYNLL1P6-201ENST00000503440 264 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC006499.6-201ENST00000511169 607 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 MYL12AP1-201ENST00000518490 515 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms