Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RPL32P9-201ENST00000487963 407 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 SCARNA18.1-201ENST00000516330 83 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 Y_RNA.682-201ENST00000516457 100 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 RN7SKP40-201ENST00000517211 242 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC060775.1-201ENST00000518241 520 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC009902.1-201ENST00000519351 183 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AP003396.4-201ENST00000527574 265 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 OR5M2P-201ENST00000529003 936 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AP000676.2-201ENST00000529711 301 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AL389895.1-201ENST00000554127 252 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC091078.2-201ENST00000557145 559 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC008521.2-201ENST00000591021 259 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 RNU6-89P-201ENST00000606519 100 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AL133481.2-203ENST00000607558 139 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AL352984.2-202ENST00000613699 155 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 MIR6729-201ENST00000618194 65 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC026634.1-201ENST00000634369 198 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 MFSD8-239ENST00000641590 2479 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 RNU6-169P-201ENST00000365336 107 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 Y_RNA.373-201ENST00000365600 103 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 MRPL42P3-201ENST00000401492 326 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AL359634.1-202ENST00000404721 284 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 MIR548F5-201ENST00000408421 86 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AL590609.2-201ENST00000421430 368 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 RGS17P1-201ENST00000423358 553 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC007283.2-201ENST00000424739 197 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 BX323845.3-201ENST00000428215 527 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC096644.2-201ENST00000429278 159 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 ERLEC1P1-201ENST00000433806 578 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 TUBB4BP6-201ENST00000437576 479 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC023141.8-201ENST00000442554 208 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 UBFD1P1-201ENST00000473259 814 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC015724.1-201ENST00000478577 156 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC104564.1-201ENST00000493028 407 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AL035404.1-201ENST00000497982 568 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC091885.1-201ENST00000506658 268 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 Y_RNA.665-201ENST00000516177 98 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 OR4R1P-201ENST00000529879 463 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC007956.1-201ENST00000555623 542 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4DQ86TL0 MIR4776-2-201ENST00000580204 80 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 MIR3614-201ENST00000581261 86 ntBASIC5.31□□□□□ -1.56
ATG4DQ86TL0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms