Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 SNRPCP3-201ENST00000474888 476 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC005912.1-201ENST00000495392 255 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC091885.1-201ENST00000506658 268 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 SNORD27.1-201ENST00000516319 72 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 RNA5SP337-201ENST00000517007 109 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC060775.1-201ENST00000518241 520 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 PSMA2P1-201ENST00000526365 646 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 SETP2-201ENST00000553886 926 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC105224.1-201ENST00000587055 421 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC006116.10-201ENST00000591836 581 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 DPPA3P3-201ENST00000603842 430 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AL133481.2-203ENST00000607558 139 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AL355816.1-201ENST00000607951 118 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AL355472.4-201ENST00000610233 626 ntBASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.52□□□□□ -1.53
UBE3DQ7Z6J8 MTND5P33-201ENST00000571250 1450 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 DNM1P47-203ENST00000571780 12667 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 RNU6-28P-201ENST00000362378 107 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 SNORA33.2-201ENST00000365413 134 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 RNU4-48P-201ENST00000365559 182 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 MIR1-2-201ENST00000384961 85 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 MIR514A2-201ENST00000385131 88 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 MIR514A3-201ENST00000385132 88 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 DSTNP4-201ENST00000399472 474 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 CHEK2P3-201ENST00000416118 248 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AL451054.2-201ENST00000420896 202 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 HSPE1P1-201ENST00000421494 318 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 DUTP6-201ENST00000425573 462 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 LYPLA1P1-201ENST00000434514 622 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC108734.1-201ENST00000439549 399 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 EIF5AP4-201ENST00000441206 465 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 HMGN1P2-201ENST00000445197 310 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC073415.1-201ENST00000449240 153 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 snoU13.29-201ENST00000459370 104 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC105384.2-201ENST00000508433 640 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 HMGN2P36-201ENST00000529541 409 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AP000907.2-201ENST00000530827 353 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC096996.1-201ENST00000563813 325 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 MIR3146-201ENST00000580367 79 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AL513327.3-201ENST00000602618 469 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AL078596.1-201ENST00000624856 447 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AC129915.3-201ENST00000634128 948 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
UBE3DQ7Z6J8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE3DQ7Z6J8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.5□□□□□ -1.53
UBE3DQ7Z6J8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE3DQ7Z6J8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBE3DQ7Z6J8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE3DQ7Z6J8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
UBE3DQ7Z6J8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBE3DQ7Z6J8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms