Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL513328.1-201ENST00000446460 224 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 RPL37P4-201ENST00000448908 268 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 METTL15P1-201ENST00000481421 1045 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 EEF1A1P37-201ENST00000522748 715 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS13CQ709C8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VPS13CQ709C8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13CQ709C8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13CQ709C8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13CQ709C8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13CQ709C8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS13CQ709C8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.5□□□□□ -2.01
VPS13CQ709C8 AC007563.3-201ENST00000433233 371 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 RPL23AP67-201ENST00000465341 474 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 AC008549.1-201ENST00000512900 643 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS13CQ709C8 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13CQ709C8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13CQ709C8 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13CQ709C8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13CQ709C8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 AC046144.1-201ENST00000478559 1853 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13CQ709C8 SNORA9.2-201ENST00000365361 133 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 AL360182.1-201ENST00000397433 468 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 RN7SKP56-201ENST00000410513 331 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 AL513174.1-201ENST00000423182 629 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 RN7SKP31-201ENST00000516354 278 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 RN7SKP244-201ENST00000516513 307 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 PLCE1P1-201ENST00000622094 305 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 IGHVIII-44-202ENST00000636235 289 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13CQ709C8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13CQ709C8 NCOA4P2-201ENST00000340589 1813 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 AC005332.5-201ENST00000591222 2919 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 RNA5SP39-201ENST00000411245 120 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 AC069499.1-201ENST00000489433 509 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 AC011270.1-201ENST00000558606 583 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 AC015871.2-201ENST00000603605 948 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13CQ709C8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 RNA5SP68-201ENST00000363885 119 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13CQ709C8 MIR513A2-201ENST00000385249 127 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 U3.42-201ENST00000408746 214 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 FTH1P6-201ENST00000430768 320 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 RPS24P13-201ENST00000442520 397 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 AC010307.1-201ENST00000467206 836 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 PCBP2P3-201ENST00000509726 843 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 HIGD1AP13-201ENST00000509878 289 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 AP001636.2-201ENST00000525517 696 ntBASIC2.49□□□□□ -2.01
VPS13CQ709C8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
VPS13CQ709C8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC118273.1-201ENST00000525324 3006 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 MTND2P25-201ENST00000449028 610 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC090525.1-201ENST00000479116 478 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 HMGB3P14-201ENST00000494195 599 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 PRELID3BP8-201ENST00000604148 295 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13CQ709C8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 NECAP1P2-201ENST00000455668 727 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC099063.3-201ENST00000642066 185 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13CQ709C8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13CQ709C8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13CQ709C8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13CQ709C8 RPL7L1P1-201ENST00000448259 785 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC017037.2-201ENST00000513850 890 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS13CQ709C8 SULT1C2P2-201ENST00000562517 294 ntBASIC2.48□□□□□ -2.01
VPS13CQ709C8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13CQ709C8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13CQ709C8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms