Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC093775.1-201ENST00000624154 1868 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC011455.2-201ENST00000599320 3336 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 RNA5SP319-201ENST00000362768 119 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 RN7SKP95-201ENST00000362860 303 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 RNU6-522P-201ENST00000364497 107 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 SNORA43.1-201ENST00000364863 140 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 RNU6-1081P-201ENST00000384537 107 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.646-201ENST00000410980 101 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 TMSB4XP3-201ENST00000445144 114 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC097493.1-201ENST00000463958 372 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 RPS18P6-201ENST00000476880 458 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 PGAM1P13-201ENST00000507497 754 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC067942.3-201ENST00000512025 362 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 RNU6-566P-201ENST00000516790 107 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.700-201ENST00000516806 100 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 RN7SKP147-201ENST00000517154 244 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 SNORA81.3-201ENST00000517283 198 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC012400.1-201ENST00000518452 381 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC092375.1-201ENST00000550410 637 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC012409.4-201ENST00000612923 249 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC130324.3-201ENST00000614165 542 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC098657.3-201ENST00000620434 263 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 AC008957.3-201ENST00000624112 2242 ntBASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RSPO4Q2I0M5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 MAPK10-287ENST00000641217 3037 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.270-201ENST00000364693 104 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 RNU6-169P-201ENST00000365336 107 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.461-201ENST00000384263 103 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.482-201ENST00000384377 111 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 MIR1-2-201ENST00000384961 85 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 CYB5AP4-201ENST00000396692 399 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 AL109941.1-201ENST00000401925 229 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 BOLA3P4-201ENST00000418151 400 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 RPS15AP30-201ENST00000420976 390 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 CYCSP52-201ENST00000422857 310 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 AC019097.1-201ENST00000424783 735 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 RSL24D1P6-201ENST00000426934 401 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 AL049745.1-201ENST00000433953 286 ntBASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.78□□□□□ -1.48
RSPO4Q2I0M5 YWHAZP8-201ENST00000436935 731 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms