Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC021451.1-201ENST00000523498 1129 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX1Q15475 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX1Q15475 AC084824.1-201ENST00000550917 1005 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX1Q15475 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.84□□□□□ -1.79
SIX1Q15475 ATP5F1P7-201ENST00000567330 760 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AGGF1P6-201ENST00000569213 976 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX1Q15475 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 VN1R87P-201ENST00000596706 487 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.84□□□□□ -1.79
SIX1Q15475 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.84□□□□□ -1.79
SIX1Q15475 AL022067.1-201ENST00000602426 454 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC067959.1-201ENST00000604334 379 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 RNU1-30P-201ENST00000606575 163 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC055764.2-201ENST00000610089 670 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 STMN1P1-201ENST00000617809 440 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC112484.5-201ENST00000624189 228 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX1Q15475 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SIX1Q15475 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX1Q15475 AC106754.1-201ENST00000562632 1513 ntBASIC3.84□□□□□ -1.8
SIX1Q15475 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SIX1Q15475 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIX1Q15475 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.84□□□□□ -1.8
SIX1Q15475 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.84□□□□□ -1.8
SIX1Q15475 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIX1Q15475 SEC63P2-201ENST00000503863 1939 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SIX1Q15475 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SIX1Q15475 SAGE2P-201ENST00000420011 2126 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 MAPK10-373ENST00000641983 6772 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX1Q15475 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 MIR372-201ENST00000362225 67 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 RNA5SP515-201ENST00000364570 118 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 RPL23AP48-201ENST00000406913 488 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 MTATP6P31-201ENST00000406985 692 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX1Q15475 AC048351.1-201ENST00000420064 602 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 HSFY6P-201ENST00000445573 403 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 SEPT14P24-201ENST00000447236 180 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX1Q15475 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SIX1Q15475 MRPS31P2-201ENST00000451581 518 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX1Q15475 FCF1P3-201ENST00000496394 590 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX1Q15475 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX1Q15475 OR7E13P-201ENST00000526052 910 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.83□□□□□ -1.8
SIX1Q15475 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX1Q15475 AL121594.4-201ENST00000556211 1196 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX1Q15475 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX1Q15475 AC120057.2-201ENST00000571520 271 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 Z82195.1-201ENST00000604558 398 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 FP236240.3-201ENST00000623061 327 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX1Q15475 U6.107-201ENST00000637108 79 ntBASIC3.83□□□□□ -1.8
SIX1Q15475 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX1Q15475 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SIX1Q15475 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX1Q15475 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SIX1Q15475 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SIX1Q15475 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SIX1Q15475 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX1Q15475 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX1Q15475 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 ENSAP3-201ENST00000312710 333 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX1Q15475 RNU1-13P-201ENST00000384499 162 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SIX1Q15475 DNAJC19P6-201ENST00000401853 280 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 MTHFD2P2-201ENST00000407725 247 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 SNORA11-201ENST00000408789 128 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 MTCO2P8-201ENST00000412213 658 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX1Q15475 AL590609.2-201ENST00000421430 368 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 SDCBPP2-201ENST00000424643 885 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX1Q15475 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 RRM2P4-201ENST00000441721 562 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 OR51B8P-201ENST00000449892 769 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 OR9M1P-201ENST00000459641 921 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX1Q15475 AC084357.1-201ENST00000473404 255 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms