Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL592293.2-201ENST00000422292 996 ntBASIC4.22□□□□□ -1.73
LTBQ06643 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 C8orf59P1-201ENST00000429930 303 ntBASIC4.22□□□□□ -1.73
LTBQ06643 USP9YP31-201ENST00000431405 881 ntBASIC4.22□□□□□ -1.73
LTBQ06643 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.22□□□□□ -1.73
LTBQ06643 RPL7P29-201ENST00000437151 728 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AL591363.1-201ENST00000450091 483 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.22□□□□□ -1.73
LTBQ06643 AC010618.1-201ENST00000469924 477 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC073522.1-201ENST00000483312 377 ntBASIC4.22□□□□□ -1.73
LTBQ06643 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.22□□□□□ -1.73
LTBQ06643 DEFB109F-201ENST00000491870 277 ntBASIC4.22□□□□□ -1.73
LTBQ06643 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.22□□□□□ -1.73
LTBQ06643 AC109927.2-201ENST00000506416 303 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC010460.1-201ENST00000507087 466 ntBASIC4.22□□□□□ -1.73
LTBQ06643 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LTBQ06643 LTV1P1-201ENST00000510683 1237 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC021146.3-201ENST00000511911 260 ntBASIC4.22□□□□□ -1.73
LTBQ06643 RNU6-720P-201ENST00000516363 108 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.22□□□□□ -1.73
LTBQ06643 NPM1P6-201ENST00000521088 871 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.22□□□□□ -1.73
LTBQ06643 RPL21P7-201ENST00000557463 483 ntBASIC4.22□□□□□ -1.73
LTBQ06643 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.22□□□□□ -1.73
LTBQ06643 AC106785.1-201ENST00000565935 262 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC034105.4-201ENST00000568304 277 ntBASIC4.22□□□□□ -1.73
LTBQ06643 RN7SL652P-201ENST00000577769 300 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC023575.1-201ENST00000580510 358 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LTBQ06643 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.22□□□□□ -1.73
LTBQ06643 AC022146.1-201ENST00000595307 847 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AP003465.2-201ENST00000602571 373 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.22□□□□□ -1.73
LTBQ06643 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.22□□□□□ -1.73
LTBQ06643 AC018755.4-201ENST00000619715 454 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AL590240.3-201ENST00000621416 943 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AC067931.1-201ENST00000624190 671 ntBASIC4.22□□□□□ -1.73
LTBQ06643 AL359740.1-201ENST00000624340 592 ntBASIC4.22□□□□□ -1.73
LTBQ06643 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.22□□□□□ -1.73
LTBQ06643 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LTBQ06643 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LTBQ06643 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LTBQ06643 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.22□□□□□ -1.73
LTBQ06643 AC005832.2-201ENST00000538921 1430 ntBASIC4.21□□□□□ -1.73
LTBQ06643 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
LTBQ06643 AL137100.1-201ENST00000556703 1620 ntBASIC4.21□□□□□ -1.73
LTBQ06643 AC027514.1-201ENST00000588561 1603 ntBASIC4.21□□□□□ -1.73
LTBQ06643 AC021242.1-201ENST00000507315 2035 ntBASIC4.21□□□□□ -1.74
LTBQ06643 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.21□□□□□ -1.74
LTBQ06643 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LTBQ06643 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.21□□□□□ -1.74
LTBQ06643 OR4K15-201ENST00000305051 1216 ntBASIC4.21□□□□□ -1.74
LTBQ06643 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.21□□□□□ -1.74
LTBQ06643 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 U3.4-201ENST00000363352 213 ntBASIC4.21□□□□□ -1.74
LTBQ06643 SNORD65.1-201ENST00000390889 71 ntBASIC4.21□□□□□ -1.74
LTBQ06643 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 AL034374.1-201ENST00000406329 351 ntBASIC4.21□□□□□ -1.74
LTBQ06643 RN7SKP100-201ENST00000411258 284 ntBASIC4.21□□□□□ -1.74
LTBQ06643 RPL7P8-201ENST00000411964 730 ntBASIC4.21□□□□□ -1.74
LTBQ06643 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.21□□□□□ -1.74
LTBQ06643 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.21□□□□□ -1.74
LTBQ06643 AC022022.1-201ENST00000430304 178 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC009263.1-201ENST00000441193 1239 ntBASIC4.21□□□□□ -1.74
LTBQ06643 Z95327.1-201ENST00000446082 482 ntBASIC4.21□□□□□ -1.74
LTBQ06643 ARL2BPP10-201ENST00000446487 531 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.21□□□□□ -1.74
LTBQ06643 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.21□□□□□ -1.74
LTBQ06643 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.21□□□□□ -1.74
LTBQ06643 AC005008.1-201ENST00000456151 612 ntBASIC4.21□□□□□ -1.74
LTBQ06643 SRRM1P2-201ENST00000464531 1192 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC090142.1-201ENST00000465776 462 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC021205.1-201ENST00000468797 348 ntBASIC4.21□□□□□ -1.74
LTBQ06643 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.21□□□□□ -1.74
LTBQ06643 PRELID3BP7-201ENST00000503606 469 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.21□□□□□ -1.74
LTBQ06643 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.21□□□□□ -1.74
LTBQ06643 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.21□□□□□ -1.74
LTBQ06643 RN7SKP276-201ENST00000516242 268 ntBASIC4.21□□□□□ -1.74
LTBQ06643 IGKV2-23-201ENST00000518729 323 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.21□□□□□ -1.74
LTBQ06643 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.21□□□□□ -1.74
LTBQ06643 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 AC005832.3-201ENST00000537929 631 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.21□□□□□ -1.74
LTBQ06643 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.21□□□□□ -1.74
LTBQ06643 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.21□□□□□ -1.74
LTBQ06643 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms