Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 OR5BR1P-201ENST00000524992 1330 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CX3CL1P78423 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CX3CL1P78423 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CX3CL1P78423 OR5H2-201ENST00000355273 945 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CX3CL1P78423 RN7SKP115-201ENST00000363177 317 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 SNORA4.1-201ENST00000364263 144 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AC016769.3-201ENST00000396562 315 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 ARF4P3-201ENST00000397387 509 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 EIF5P1-201ENST00000400019 1231 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 MIR921-201ENST00000401133 56 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 RN7SKP267-201ENST00000410381 285 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CL1P78423 NIPA2P1-201ENST00000426223 976 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 AL035410.1-201ENST00000427409 427 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CL1P78423 UBE2D3P1-201ENST00000436669 444 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CL1P78423 MTND5P2-201ENST00000442927 1142 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 MTCYBP3-201ENST00000445588 1137 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AL606662.1-201ENST00000445763 553 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 CEACAMP6-201ENST00000452007 574 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 NCOR1P1-202ENST00000486162 291 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 HSPE1P23-201ENST00000509838 286 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AC093281.2-201ENST00000510153 597 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 RNU2-30P-201ENST00000516209 141 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CL1P78423 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CL1P78423 PDCD5P1-201ENST00000543528 309 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 UBE2NP1-201ENST00000545592 458 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CL1P78423 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 AL133457.1-201ENST00000564251 987 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CL1P78423 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 AC010680.4-201ENST00000605334 543 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 FAM25E-202ENST00000608562 189 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AL049539.1-201ENST00000611964 459 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 AL607023.1-201ENST00000620045 248 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AL023881.1-201ENST00000621088 301 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AL359757.1-201ENST00000623176 255 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 AC004943.3-201ENST00000624116 600 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CX3CL1P78423 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CX3CL1P78423 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CL1P78423 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.72□□□□□ -1.81
CX3CL1P78423 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
CX3CL1P78423 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
CX3CL1P78423 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CX3CL1P78423 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CX3CL1P78423 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CL1P78423 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CL1P78423 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CX3CL1P78423 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CX3CL1P78423 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CX3CL1P78423 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CX3CL1P78423 Y_RNA.169-201ENST00000363745 96 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 RNU1-130P-201ENST00000363930 160 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CL1P78423 MIR153-1-201ENST00000384914 90 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AL590084.2-201ENST00000401481 382 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 Z98745.1-201ENST00000402553 494 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 USP9YP33-201ENST00000412220 421 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AC140479.3-201ENST00000418944 1126 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AL022400.1-201ENST00000423946 935 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AL593851.1-201ENST00000426171 157 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 LYPLA1P1-201ENST00000434514 622 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 USP9YP35-201ENST00000435696 412 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.71□□□□□ -1.82
CX3CL1P78423 MTND2P19-201ENST00000449129 1012 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AC010469.1-201ENST00000463864 576 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
CX3CL1P78423 RPS26P28-201ENST00000470806 348 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC011005.3-201ENST00000491624 395 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CL1P78423 AC108078.3-201ENST00000502633 489 ntBASIC3.71□□□□□ -1.82
CX3CL1P78423 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms