Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNA1P78396 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNA1P78396 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNA1P78396 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.18□□□□□ -1.74
CCNA1P78396 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CCNA1P78396 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.18□□□□□ -1.74
CCNA1P78396 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCNA1P78396 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CCNA1P78396 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCNA1P78396 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.18□□□□□ -1.74
CCNA1P78396 MIR634-201ENST00000385208 97 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 RNA5SP104-201ENST00000410989 118 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AL035458.1-201ENST00000433096 585 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AC005019.1-201ENST00000436455 431 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.18□□□□□ -1.74
CCNA1P78396 AC098824.1-201ENST00000453565 980 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.18□□□□□ -1.74
CCNA1P78396 AC146507.1-201ENST00000468335 354 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AC017015.1-201ENST00000477387 286 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 HMGB1P3-201ENST00000502802 616 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.18□□□□□ -1.74
CCNA1P78396 RN7SKP234-201ENST00000517173 224 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.18□□□□□ -1.74
CCNA1P78396 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.18□□□□□ -1.74
CCNA1P78396 POLR2KP1-201ENST00000553226 168 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.18□□□□□ -1.74
CCNA1P78396 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AL109741.3-201ENST00000561748 592 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 MIR5186-201ENST00000577504 120 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.18□□□□□ -1.74
CCNA1P78396 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.18□□□□□ -1.74
CCNA1P78396 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.18□□□□□ -1.74
CCNA1P78396 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.18□□□□□ -1.74
CCNA1P78396 MRPS35P3-201ENST00000603189 709 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AC069304.3-201ENST00000603938 1084 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AC005000.2-201ENST00000605468 310 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.18□□□□□ -1.74
CCNA1P78396 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.18□□□□□ -1.74
CCNA1P78396 AC138649.5-201ENST00000637456 137 ntBASIC4.18□□□□□ -1.74
CCNA1P78396 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
CCNA1P78396 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCNA1P78396 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCNA1P78396 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCNA1P78396 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNA1P78396 MFSD8-236ENST00000641509 4050 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNA1P78396 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCNA1P78396 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.17□□□□□ -1.74
CCNA1P78396 MAPK10-253ENST00000641010 4072 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 U3.19-201ENST00000390893 196 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCNA1P78396 AL512504.1-201ENST00000415494 778 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.17□□□□□ -1.74
CCNA1P78396 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.17□□□□□ -1.74
CCNA1P78396 HSFY1P1-201ENST00000423928 1178 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 ELOCP18-201ENST00000434209 337 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.17□□□□□ -1.74
CCNA1P78396 RPS15AP29-201ENST00000445539 400 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.17□□□□□ -1.74
CCNA1P78396 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.17□□□□□ -1.74
CCNA1P78396 TMED11P-201ENST00000479478 690 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 AC107398.1-201ENST00000486904 505 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 RPL5P23-201ENST00000496040 868 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 AC025445.1-201ENST00000502728 300 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCNA1P78396 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 GMPSP1-201ENST00000514075 579 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 RN7SKP57-201ENST00000517248 293 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 SUMO2P20-201ENST00000520803 283 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.17□□□□□ -1.74
CCNA1P78396 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 AC012603.1-201ENST00000606424 528 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 AC112503.1-201ENST00000608436 391 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 MIR8058-201ENST00000615737 89 ntBASIC4.17□□□□□ -1.74
CCNA1P78396 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNA1P78396 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCNA1P78396 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CCNA1P78396 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CCNA1P78396 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNA1P78396 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCNA1P78396 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.16□□□□□ -1.74
CCNA1P78396 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNA1P78396 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CCNA1P78396 SNORA70E-201ENST00000384492 135 ntBASIC4.16□□□□□ -1.74
CCNA1P78396 HLFP1-201ENST00000402375 499 ntBASIC4.16□□□□□ -1.74
CCNA1P78396 RNA5SP120-201ENST00000410900 112 ntBASIC4.16□□□□□ -1.74
CCNA1P78396 PTP4A1P5-201ENST00000420305 455 ntBASIC4.16□□□□□ -1.74
CCNA1P78396 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNA1P78396 ELOCP8-201ENST00000439309 332 ntBASIC4.16□□□□□ -1.74
CCNA1P78396 ELOCP15-201ENST00000442090 332 ntBASIC4.16□□□□□ -1.74
CCNA1P78396 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.16□□□□□ -1.74
CCNA1P78396 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms