Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SGO1P2-201ENST00000429458 1589 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLDN2P57739 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 IL6STP1-201ENST00000346911 1020 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 Y_RNA.25-201ENST00000362528 102 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN2P57739 SNORD116-8-201ENST00000384365 95 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 MIR506-201ENST00000384998 124 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 VDAC2P1-201ENST00000399358 958 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AC097374.1-203ENST00000400783 485 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN2P57739 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN2P57739 RN7SKP263-201ENST00000411194 309 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AC004022.2-201ENST00000413824 193 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 MTND2P18-201ENST00000419962 1030 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 SAGE2P-201ENST00000420011 2126 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 MTND4P20-201ENST00000424125 869 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 RPL31P54-201ENST00000429803 370 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN2P57739 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 OR4C10P-201ENST00000434991 931 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN2P57739 YWHAZP8-201ENST00000436935 731 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AC105402.2-201ENST00000438503 358 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AC114495.1-201ENST00000441274 436 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AC114755.5-201ENST00000447760 831 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 AL591623.2-201ENST00000449978 222 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN2P57739 AL109741.2-201ENST00000455561 343 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 RPL7AP28-201ENST00000464513 571 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 SETP14-201ENST00000497538 873 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.32□□□□□ -1.72
CLDN2P57739 AC008958.1-201ENST00000511047 682 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 RNA5SP446-201ENST00000515955 82 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 RNA5SP49-201ENST00000516450 115 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN2P57739 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.32□□□□□ -1.72
CLDN2P57739 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.32□□□□□ -1.72
CLDN2P57739 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.32□□□□□ -1.72
CLDN2P57739 HIGD1AP17-201ENST00000554576 276 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 TRAV15-201ENST00000556680 249 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN2P57739 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN2P57739 AL591034.3-201ENST00000605511 685 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN2P57739 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN2P57739 CU459211.1-201ENST00000635667 749 ntBASIC4.32□□□□□ -1.72
CLDN2P57739 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN2P57739 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN2P57739 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.31□□□□□ -1.72
CLDN2P57739 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN2P57739 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLDN2P57739 LARP1BP1-201ENST00000506036 1359 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 AC093535.2-201ENST00000624769 2326 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 OR5H2-201ENST00000355273 945 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLDN2P57739 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN2P57739 Y_RNA.408-201ENST00000383987 102 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 RNU6-1293P-201ENST00000384077 107 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 RNA5SP317-201ENST00000410176 116 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 RNA5SP36-201ENST00000410197 133 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 RNA5SP311-201ENST00000411290 116 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN2P57739 UBE2V1P1-201ENST00000430836 445 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN2P57739 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN2P57739 GEMIN8P3-201ENST00000445417 720 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN2P57739 RPL35P6-201ENST00000490024 372 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 RN7SL691P-201ENST00000494487 301 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 MTND1P22-201ENST00000510572 951 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN2P57739 RNA5SP315-201ENST00000516340 116 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 RNA5SP312-201ENST00000517068 116 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN2P57739 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN2P57739 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN2P57739 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.31□□□□□ -1.72
CLDN2P57739 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN2P57739 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN2P57739 RNF138P2-201ENST00000603490 592 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 AC091946.2-201ENST00000606105 291 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 AC090948.2-201ENST00000607363 564 ntBASIC4.31□□□□□ -1.72
CLDN2P57739 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms