Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN18P56856 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN18P56856 AL136097.1-201ENST00000456945 913 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 ACTR3P3-201ENST00000480448 893 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 RPL21P129-201ENST00000491732 478 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 AC108941.1-201ENST00000502853 530 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 AC007991.1-201ENST00000522680 631 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 OR5AK3P-201ENST00000527486 1297 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN18P56856 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN18P56856 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN18P56856 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN18P56856 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN18P56856 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN18P56856 AC090312.2-201ENST00000582687 378 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN18P56856 MRPS35P3-201ENST00000603189 709 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 AL354760.1-201ENST00000608357 643 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN18P56856 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CLDN18P56856 AC020978.9-201ENST00000624380 1141 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN18P56856 AC012442.3-202ENST00000636742 206 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN18P56856 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDN18P56856 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN18P56856 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN18P56856 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN18P56856 AC024560.2-201ENST00000507981 1497 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.4□□□□□ -1.86
CLDN18P56856 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN18P56856 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN18P56856 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
CLDN18P56856 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN18P56856 AL592494.2-201ENST00000425455 1548 ntBASIC3.4□□□□□ -1.86
CLDN18P56856 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN18P56856 ZNF90P1-201ENST00000480493 1951 ntBASIC3.4□□□□□ -1.86
CLDN18P56856 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN18P56856 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN18P56856 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN18P56856 SNORA31-201ENST00000362607 130 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 SNORA62.3-201ENST00000365110 153 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AL359837.1-201ENST00000381357 287 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 PTMAP2-201ENST00000397627 327 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN18P56856 RAB9AP3-201ENST00000412737 573 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN18P56856 TCEA1P2-201ENST00000420496 906 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AC092647.1-201ENST00000420654 287 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AL590623.1-201ENST00000427864 105 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AC087650.1-201ENST00000431445 468 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN18P56856 SETD6P1-201ENST00000444575 317 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 RPL6P5-201ENST00000445678 828 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AC044797.1-201ENST00000445744 679 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 MTND2P25-201ENST00000449028 610 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 RAB9AP1-201ENST00000449393 573 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN18P56856 HMGB3P22-202ENST00000451823 572 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 UBDP1-202ENST00000457888 382 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN18P56856 SNRPGP3-201ENST00000469405 227 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN18P56856 AC084198.1-201ENST00000477747 402 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN18P56856 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN18P56856 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN18P56856 AP002812.1-201ENST00000495378 474 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 UBE2CP3-201ENST00000502715 450 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 RAC1P2-201ENST00000511164 579 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 MTCO1P24-201ENST00000515438 1558 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 IGKV2-23-201ENST00000518729 323 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 TRMT10BP1-201ENST00000519377 943 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN18P56856 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN18P56856 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN18P56856 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN18P56856 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN18P56856 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN18P56856 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN18P56856 AL009028.1-201ENST00000604895 802 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 SNORA62.6-201ENST00000606322 83 ntBASIC3.4□□□□□ -1.87
CLDN18P56856 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN18P56856 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLDN18P56856 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN18P56856 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
CLDN18P56856 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN18P56856 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN18P56856 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN18P56856 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN18P56856 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN18P56856 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN18P56856 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN18P56856 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN18P56856 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 ATP5F1P3-201ENST00000397213 657 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 TAF9BP2-201ENST00000400856 499 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 HSPE1P26-201ENST00000405341 275 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms