Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL355365.1-201ENST00000616480 294 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 U6.48-201ENST00000618523 106 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 MIR6852-201ENST00000621699 66 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 SCARNA15.3-201ENST00000626315 122 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 SCARNA4.1-201ENST00000628597 123 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN6P56747 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN6P56747 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN6P56747 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN6P56747 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN6P56747 GTF2H2B-203ENST00000508065 1432 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN6P56747 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN6P56747 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN6P56747 MAPK10-373ENST00000641983 6772 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN6P56747 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CLDN6P56747 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CLDN6P56747 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN6P56747 RNU4-35P-201ENST00000362588 141 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 RNA5SP502-201ENST00000362694 119 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 RNU1-33P-201ENST00000364249 162 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 RAC1P3-201ENST00000416129 580 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 AC234782.4-201ENST00000417646 1048 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.53□□□□□ -1.84
CLDN6P56747 AC092832.1-201ENST00000422934 400 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 AL390879.2-203ENST00000426943 1121 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 ATP5JP1-201ENST00000431631 322 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 RPL21P110-201ENST00000433345 446 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN6P56747 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN6P56747 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN6P56747 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN6P56747 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 AC109458.1-201ENST00000508858 316 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 FTH1P9-201ENST00000513251 355 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 AC103843.2-201ENST00000530523 682 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 AL121594.4-201ENST00000556211 1196 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 MTCO3P22-201ENST00000603219 784 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 HMGB1P50-201ENST00000605814 607 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 AP003392.5-201ENST00000607857 415 ntBASIC3.53□□□□□ -1.84
CLDN6P56747 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN6P56747 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN6P56747 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN6P56747 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CLDN6P56747 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLDN6P56747 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN6P56747 BDP1P-201ENST00000582658 1990 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN6P56747 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN6P56747 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN6P56747 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC007342.9-201ENST00000623877 1385 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN6P56747 MTND4P31-201ENST00000425607 1343 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN6P56747 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLDN6P56747 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLDN6P56747 RNU1-89P-201ENST00000384592 164 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLDN6P56747 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN6P56747 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN6P56747 MTCO1P57-201ENST00000432182 261 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC096638.2-201ENST00000434965 711 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN6P56747 AL356535.1-201ENST00000440335 398 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 SNRPGP5-201ENST00000456003 220 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 RPL37P3-201ENST00000456825 293 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 SNORD108-201ENST00000459332 71 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN6P56747 AL136126.1-201ENST00000473603 402 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 RN7SL271P-201ENST00000487601 295 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC110792.2-201ENST00000510278 224 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 RNU6-889P-201ENST00000517189 103 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 AC090136.1-201ENST00000520009 240 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN6P56747 OR7E13P-201ENST00000526052 910 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN6P56747 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.52□□□□□ -1.85
CLDN6P56747 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN6P56747 AC006077.1-201ENST00000604746 343 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN6P56747 U4.6-201ENST00000621618 127 ntBASIC3.52□□□□□ -1.85
CLDN6P56747 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN6P56747 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN6P56747 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN6P56747 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CLDN6P56747 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN6P56747 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CLDN6P56747 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN6P56747 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms