Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC009902.3-201ENST00000606235 2172 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA1P56159 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 OR52B1P-201ENST00000316506 909 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 Y_RNA.263-201ENST00000364659 114 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 RNU6-169P-201ENST00000365336 107 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
GFRA1P56159 RNA5SP91-201ENST00000390902 119 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 RPL7P60-201ENST00000397636 735 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 RN7SKP263-201ENST00000411194 309 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA1P56159 RPL12P34-201ENST00000424532 479 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 OR4F13P-201ENST00000428478 931 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 AC006335.2-201ENST00000437993 330 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AC127537.2-201ENST00000439258 465 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 BNIP3P2-201ENST00000441221 577 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AC079781.2-201ENST00000446424 169 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA1P56159 EIF4A1P11-201ENST00000451239 222 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 RN7SL72P-201ENST00000460697 269 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 CR383656.1-201ENST00000484916 377 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 RNA5SP337-201ENST00000517007 109 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 IGKV2-19-201ENST00000518132 283 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 NRBF2P4-201ENST00000520874 850 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.13□□□□□ -1.59
GFRA1P56159 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 OR4R1P-201ENST00000529879 463 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA1P56159 AC123904.3-201ENST00000547218 814 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA1P56159 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 AL049872.1-201ENST00000556323 322 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA1P56159 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA1P56159 HMGB1P6-201ENST00000569046 646 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AC005261.5-201ENST00000596280 355 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 AL513327.3-201ENST00000602618 469 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 AC025449.1-201ENST00000603896 529 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AL133481.2-203ENST00000607558 139 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA1P56159 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 AC093648.1-201ENST00000623546 606 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 AL691477.1-201ENST00000624398 162 ntBASIC5.13□□□□□ -1.59
GFRA1P56159 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
GFRA1P56159 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.13□□□□□ -1.59
GFRA1P56159 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA1P56159 LINC01963-201ENST00000562038 3148 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
GFRA1P56159 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA1P56159 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA1P56159 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA1P56159 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.12□□□□□ -1.59
GFRA1P56159 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
GFRA1P56159 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.12□□□□□ -1.59
GFRA1P56159 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
GFRA1P56159 Y_RNA.72-201ENST00000362894 103 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 RNU6-451P-201ENST00000362921 107 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 Y_RNA.86-201ENST00000363020 111 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 Y_RNA.381-201ENST00000365666 102 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 RNU6-178P-201ENST00000384631 104 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 MIR143-201ENST00000385300 106 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA1P56159 AC068050.1-201ENST00000394891 380 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA1P56159 RN7SKP279-201ENST00000411383 298 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.12□□□□□ -1.59
GFRA1P56159 AC004987.3-201ENST00000413879 771 ntBASIC5.12□□□□□ -1.59
GFRA1P56159 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms