Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTND2P20-201ENST00000440805 661 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 MTND2P19-201ENST00000449129 1012 ntBASIC4.21□□□□□ -1.74
CDH12P55289 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH12P55289 AL445669.2-201ENST00000454425 421 ntBASIC4.21□□□□□ -1.74
CDH12P55289 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 AC072039.1-201ENST00000477611 581 ntBASIC4.21□□□□□ -1.74
CDH12P55289 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 RPS4XP14-201ENST00000493072 781 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AL024509.2-201ENST00000493462 493 ntBASIC4.21□□□□□ -1.74
CDH12P55289 RPL36AP41-201ENST00000493820 306 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 MTCYBP37-201ENST00000510642 1133 ntBASIC4.21□□□□□ -1.74
CDH12P55289 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH12P55289 RNU2-30P-201ENST00000516209 141 ntBASIC4.21□□□□□ -1.74
CDH12P55289 SOD1P3-201ENST00000518682 454 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 SMARCE1P4-201ENST00000523647 241 ntBASIC4.21□□□□□ -1.74
CDH12P55289 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH12P55289 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH12P55289 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 ROCK1P1-201ENST00000573767 549 ntBASIC4.21□□□□□ -1.74
CDH12P55289 MIR3667-201ENST00000581025 74 ntBASIC4.21□□□□□ -1.74
CDH12P55289 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 VN1R92P-201ENST00000598511 928 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AL031320.1-201ENST00000604177 357 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AC064872.1-201ENST00000604823 1072 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AL451086.1-201ENST00000605596 223 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AP002360.3-201ENST00000607673 710 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AC024560.3-201ENST00000608482 349 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AP001521.1-201ENST00000609150 300 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AC116447.1-201ENST00000613153 453 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AL158063.1-201ENST00000615349 536 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AC092650.2-201ENST00000619984 902 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH12P55289 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH12P55289 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH12P55289 AC092192.1-201ENST00000633154 1018 ntBASIC4.21□□□□□ -1.74
CDH12P55289 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 OR51H2P-202ENST00000641424 3046 ntBASIC4.21□□□□□ -1.74
CDH12P55289 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
CDH12P55289 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH12P55289 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH12P55289 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH12P55289 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.2□□□□□ -1.74
CDH12P55289 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH12P55289 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 NXPH1-205ENST00000602349 1953 ntBASIC4.2□□□□□ -1.74
CDH12P55289 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH12P55289 MTND5P24-201ENST00000438892 1767 ntBASIC4.2□□□□□ -1.74
CDH12P55289 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.2□□□□□ -1.74
CDH12P55289 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDH12P55289 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 Y_RNA.18-201ENST00000362461 102 ntBASIC4.2□□□□□ -1.74
CDH12P55289 RNA5SP28-201ENST00000363841 119 ntBASIC4.2□□□□□ -1.74
CDH12P55289 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDH12P55289 AL109941.1-201ENST00000401925 229 ntBASIC4.2□□□□□ -1.74
CDH12P55289 Z98745.1-201ENST00000402553 494 ntBASIC4.2□□□□□ -1.74
CDH12P55289 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH12P55289 RN7SKP100-201ENST00000411258 284 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 MTCYBP39-201ENST00000437562 491 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 AC005154.2-201ENST00000438110 379 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC016831.4-201ENST00000438302 307 ntBASIC4.2□□□□□ -1.74
CDH12P55289 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH12P55289 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH12P55289 RPL23AP35-201ENST00000451906 501 ntBASIC4.2□□□□□ -1.74
CDH12P55289 VN1R32P-201ENST00000452234 905 ntBASIC4.2□□□□□ -1.74
CDH12P55289 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH12P55289 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH12P55289 RPL7AP28-201ENST00000464513 571 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC074386.1-201ENST00000476560 767 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC013828.1-201ENST00000481845 158 ntBASIC4.2□□□□□ -1.74
CDH12P55289 OR4G11P-201ENST00000492842 939 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC008897.1-201ENST00000494006 347 ntBASIC4.2□□□□□ -1.74
CDH12P55289 MTCYBP17-201ENST00000503579 789 ntBASIC4.2□□□□□ -1.74
CDH12P55289 DSTNP2-201ENST00000504533 515 ntBASIC4.2□□□□□ -1.74
CDH12P55289 AC113430.1-201ENST00000506872 718 ntBASIC4.2□□□□□ -1.74
CDH12P55289 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH12P55289 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms