Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNA5SP372-201ENST00000390836 115 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN3P51790 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 RNU6-272P-201ENST00000411028 104 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 RNU4-22P-201ENST00000411058 166 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 KRR1P1-201ENST00000419430 803 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 MTCO2P21-201ENST00000419780 677 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC005005.2-201ENST00000420779 380 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCN3P51790 AL513175.2-201ENST00000422071 443 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCN3P51790 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN3P51790 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCN3P51790 RPS11P1-201ENST00000451072 473 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC096992.1-201ENST00000459808 709 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC146944.2-203ENST00000502493 354 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCN3P51790 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN3P51790 NPM1P41-201ENST00000512920 831 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC139495.1-202ENST00000513164 354 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC107918.3-201ENST00000533272 382 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC004217.3-201ENST00000551552 878 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 MRPS36P5-201ENST00000551909 298 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCN3P51790 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCN3P51790 MIR4716-201ENST00000579628 84 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC005412.1-201ENST00000580812 1049 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 GAS5-AS1-201ENST00000602767 694 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AL451044.1-201ENST00000604867 238 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AP005137.2-201ENST00000609238 400 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN3P51790 AC243756.2-201ENST00000618406 463 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AL157770.1-201ENST00000623049 439 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 AC090897.3-201ENST00000636973 1157 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN3P51790 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCN3P51790 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN3P51790 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
CLCN3P51790 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCN3P51790 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CLCN3P51790 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.48□□□□□ -1.69
CLCN3P51790 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCN3P51790 AL355578.1-201ENST00000607405 1328 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CLCN3P51790 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 SNORA60-201ENST00000362396 134 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 TAS2R15P-201ENST00000390674 928 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCN3P51790 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCN3P51790 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 RPL7P34-201ENST00000433316 712 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 MTCYBP31-201ENST00000438855 1122 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.48□□□□□ -1.69
CLCN3P51790 AC004022.1-201ENST00000447766 1066 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC233982.1-201ENST00000451247 436 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 PTGES3P5-201ENST00000455109 434 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 SNORA84-201ENST00000459229 133 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 RN7SL542P-201ENST00000467147 294 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC010683.1-201ENST00000473673 378 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 RN7SL132P-201ENST00000478131 296 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC126121.1-201ENST00000482313 553 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCN3P51790 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 AC113347.3-201ENST00000509113 148 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCN3P51790 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 RNU7-143P-201ENST00000516781 65 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC023632.4-201ENST00000517783 191 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.48□□□□□ -1.69
CLCN3P51790 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCN3P51790 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCN3P51790 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 OR4U1P-201ENST00000554958 912 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 CCDC58P3-201ENST00000590792 430 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms