Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CR1P49238 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CX3CR1P49238 RNU6-1339P-201ENST00000363574 91 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 RNA5SP189-201ENST00000364920 115 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 SNORA62-201ENST00000365493 153 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CR1P49238 ATF1P1-201ENST00000406040 927 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 UBE2V1P11-201ENST00000411559 285 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC244098.2-201ENST00000422068 99 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 ETF1P3-201ENST00000430422 1160 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 HMGB1P45-201ENST00000435986 653 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 MTCO3P43-201ENST00000440974 771 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.32□□□□□ -1.88
CX3CR1P49238 NANOGP10-201ENST00000453325 895 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CR1P49238 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CR1P49238 TMED11P-201ENST00000479478 690 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC108941.1-201ENST00000502853 530 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CR1P49238 RAC1P2-201ENST00000511164 579 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 NDUFB4P9-201ENST00000511646 388 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 FTH1P21-201ENST00000512179 511 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 RN7SKP83-201ENST00000516512 178 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CR1P49238 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 EIF5A2P1-201ENST00000564027 460 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.32□□□□□ -1.88
CX3CR1P49238 OR4H6P-202ENST00000603819 340 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CR1P49238 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CR1P49238 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CR1P49238 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CX3CR1P49238 RNVU1-4-201ENST00000612985 164 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 FRG1HP-204ENST00000617940 757 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.32□□□□□ -1.88
CX3CR1P49238 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CX3CR1P49238 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.32□□□□□ -1.88
CX3CR1P49238 MTND5P28-201ENST00000438005 1594 ntBASIC3.32□□□□□ -1.88
CX3CR1P49238 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CR1P49238 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CX3CR1P49238 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CX3CR1P49238 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CX3CR1P49238 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 SPRR2C-201ENST00000290702 219 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 RNU6-796P-201ENST00000391086 107 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 HSPE1P26-201ENST00000405341 275 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 AC073264.1-201ENST00000411508 416 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CR1P49238 HIGD1AP12-201ENST00000427832 281 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CR1P49238 RPS27AP12-201ENST00000429552 465 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CR1P49238 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CR1P49238 CYCSP53-201ENST00000455540 265 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 AC089999.1-201ENST00000460336 374 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CR1P49238 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CR1P49238 USP9YP5-201ENST00000511770 630 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 RNA5SP164-201ENST00000516533 110 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 AF279873.1-201ENST00000523393 313 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 AL121576.1-201ENST00000556055 276 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.31□□□□□ -1.88
CX3CR1P49238 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.31□□□□□ -1.88
CX3CR1P49238 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.31□□□□□ -1.88
CX3CR1P49238 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.31□□□□□ -1.88
CX3CR1P49238 AC090616.5-202ENST00000582111 297 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.31□□□□□ -1.88
CX3CR1P49238 AC073569.3-201ENST00000619055 682 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CX3CR1P49238 AC092608.3-201ENST00000625017 386 ntBASIC3.31□□□□□ -1.88
CX3CR1P49238 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CX3CR1P49238 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CX3CR1P49238 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms