Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MTCO1P6-201ENST00000481192 1384 ntBASIC3.99□□□□□ -1.77
SLC6A12P48065 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC6A12P48065 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC6A12P48065 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC6A12P48065 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC6A12P48065 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC6A12P48065 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC6A12P48065 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC6A12P48065 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 NMD3P1-201ENST00000439704 1488 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 DCAF13P1-201ENST00000495256 1330 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 AC099786.3-201ENST00000565735 1410 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SLC6A12P48065 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SLC6A12P48065 MIR448-201ENST00000362131 111 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 RNU4-28P-201ENST00000364739 141 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SLC6A12P48065 SNORA70E-201ENST00000384492 135 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 RNU6-272P-201ENST00000411028 104 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 MTND4P3-201ENST00000417829 541 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC6A12P48065 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.98□□□□□ -1.77
SLC6A12P48065 OR4F13P-201ENST00000428478 931 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 MTCO1P54-201ENST00000430139 712 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AL358472.1-201ENST00000431295 329 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC6A12P48065 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC6A12P48065 MTCYBP11-201ENST00000447254 1109 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 PTGES3P5-201ENST00000455109 434 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 SNORD108-201ENST00000459332 71 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 RNU7-140P-201ENST00000459546 60 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC010469.1-201ENST00000463864 576 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.98□□□□□ -1.77
SLC6A12P48065 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.98□□□□□ -1.77
SLC6A12P48065 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 AC012170.1-201ENST00000495139 359 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 BOLA3P3-201ENST00000505182 232 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.98□□□□□ -1.77
SLC6A12P48065 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC6A12P48065 AC008837.1-201ENST00000511513 412 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC119751.5-201ENST00000514077 770 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC6A12P48065 AC104417.1-201ENST00000523974 751 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 MTATP6P15-201ENST00000527233 835 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.98□□□□□ -1.77
SLC6A12P48065 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC6A12P48065 RPL23AP87-202ENST00000573039 466 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 MIR5684-201ENST00000585074 65 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.98□□□□□ -1.77
SLC6A12P48065 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 AC008638.3-201ENST00000603341 463 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC113368.1-201ENST00000603736 382 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC104662.1-201ENST00000604448 511 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AL590392.1-201ENST00000604960 446 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AC005962.2-201ENST00000611427 652 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 AC022079.1-201ENST00000621546 602 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 AL121594.5-201ENST00000631724 573 ntBASIC3.98□□□□□ -1.77
SLC6A12P48065 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SLC6A12P48065 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SLC6A12P48065 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SLC6A12P48065 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC6A12P48065 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC6A12P48065 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.97□□□□□ -1.77
SLC6A12P48065 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SLC6A12P48065 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC6A12P48065 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC6A12P48065 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC6A12P48065 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC6A12P48065 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SLC6A12P48065 RN7SKP44-201ENST00000363602 316 ntBASIC3.97□□□□□ -1.77
SLC6A12P48065 RNU4-51P-201ENST00000364206 140 ntBASIC3.97□□□□□ -1.77
SLC6A12P48065 RNU6-353P-201ENST00000364266 108 ntBASIC3.97□□□□□ -1.77
SLC6A12P48065 TAS2R15P-201ENST00000390674 928 ntBASIC3.97□□□□□ -1.77
SLC6A12P48065 MIR708-201ENST00000390708 88 ntBASIC3.97□□□□□ -1.77
SLC6A12P48065 MTCO1P56-201ENST00000401674 224 ntBASIC3.97□□□□□ -1.77
SLC6A12P48065 AL356967.1-201ENST00000406305 431 ntBASIC3.97□□□□□ -1.77
SLC6A12P48065 RN7SKP177-201ENST00000410567 355 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms