Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RNU6-1003P-201ENST00000517099 105 ntBASIC5.38□□□□□ -1.55
LTBRP36941 COX6CP8-201ENST00000522620 226 ntBASIC5.38□□□□□ -1.55
LTBRP36941 ZNF705CP-201ENST00000530515 889 ntBASIC5.38□□□□□ -1.55
LTBRP36941 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBRP36941 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBRP36941 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.38□□□□□ -1.55
LTBRP36941 LSM6P2-201ENST00000552208 177 ntBASIC5.38□□□□□ -1.55
LTBRP36941 CKS1BP3-201ENST00000600888 237 ntBASIC5.38□□□□□ -1.55
LTBRP36941 BBIP1P1-201ENST00000602999 279 ntBASIC5.38□□□□□ -1.55
LTBRP36941 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBRP36941 AC008536.2-201ENST00000607284 349 ntBASIC5.38□□□□□ -1.55
LTBRP36941 AC074140.1-201ENST00000621617 208 ntBASIC5.38□□□□□ -1.55
LTBRP36941 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBRP36941 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBRP36941 AC099654.5-201ENST00000636479 350 ntBASIC5.38□□□□□ -1.55
LTBRP36941 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LTBRP36941 AC009779.8-201ENST00000641684 4384 ntBASIC5.38□□□□□ -1.55
LTBRP36941 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LTBRP36941 XPOTP1-201ENST00000443317 2398 ntBASIC5.38□□□□□ -1.55
LTBRP36941 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBRP36941 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBRP36941 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LTBRP36941 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBRP36941 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBRP36941 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBRP36941 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.38□□□□□ -1.55
LTBRP36941 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LTBRP36941 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LTBRP36941 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBRP36941 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.37□□□□□ -1.55
LTBRP36941 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 AC097504.1-201ENST00000515103 2415 ntBASIC5.37□□□□□ -1.55
LTBRP36941 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
LTBRP36941 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.37□□□□□ -1.55
LTBRP36941 GNG5P1-201ENST00000255500 204 ntBASIC5.37□□□□□ -1.55
LTBRP36941 SNORA70H-201ENST00000383910 135 ntBASIC5.37□□□□□ -1.55
LTBRP36941 SNORA70J-201ENST00000384182 135 ntBASIC5.37□□□□□ -1.55
LTBRP36941 SNORA66-201ENST00000384792 133 ntBASIC5.37□□□□□ -1.55
LTBRP36941 U3.22-201ENST00000391120 215 ntBASIC5.37□□□□□ -1.55
LTBRP36941 ARF4P3-201ENST00000397387 509 ntBASIC5.37□□□□□ -1.55
LTBRP36941 RPS20P2-201ENST00000402520 389 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBRP36941 PIGFP2-201ENST00000421400 651 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC004975.1-201ENST00000428733 208 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AP000542.1-201ENST00000448473 371 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.37□□□□□ -1.55
LTBRP36941 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.37□□□□□ -1.55
LTBRP36941 RPL10P17-201ENST00000453852 316 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBRP36941 AC018797.3-201ENST00000513388 1241 ntBASIC5.37□□□□□ -1.55
LTBRP36941 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
LTBRP36941 GAPDHP62-201ENST00000515313 990 ntBASIC5.37□□□□□ -1.55
LTBRP36941 Y_RNA.704-201ENST00000516851 102 ntBASIC5.37□□□□□ -1.55
LTBRP36941 SCARNA20.4-201ENST00000516969 131 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBRP36941 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.37□□□□□ -1.55
LTBRP36941 OR4R3P-201ENST00000525084 838 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC109635.3-201ENST00000529536 185 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBRP36941 SULT1C2P2-201ENST00000562517 294 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBRP36941 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.37□□□□□ -1.55
LTBRP36941 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 RNF138P2-201ENST00000603490 592 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC103792.1-201ENST00000603591 919 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC245014.2-201ENST00000603689 287 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC246785.4-201ENST00000605374 287 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AP001521.2-201ENST00000608772 546 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AC009268.2-201ENST00000621925 457 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AP005264.7-201ENST00000625003 745 ntBASIC5.37□□□□□ -1.55
LTBRP36941 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.37□□□□□ -1.55
LTBRP36941 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.37□□□□□ -1.55
LTBRP36941 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.37□□□□□ -1.55
LTBRP36941 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.37□□□□□ -1.55
LTBRP36941 CASC19-280ENST00000642102 1351 ntBASIC5.37□□□□□ -1.55
LTBRP36941 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LTBRP36941 CCT4P2-201ENST00000233836 1548 ntBASIC5.37□□□□□ -1.55
LTBRP36941 AP000473.2-201ENST00000602659 1537 ntBASIC5.37□□□□□ -1.55
LTBRP36941 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBRP36941 SAMMSON-226ENST00000642089 1582 ntBASIC5.37□□□□□ -1.55
LTBRP36941 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LTBRP36941 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBRP36941 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBRP36941 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LTBRP36941 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.36□□□□□ -1.55
LTBRP36941 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LTBRP36941 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBRP36941 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LTBRP36941 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LTBRP36941 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LTBRP36941 AC092070.2-203ENST00000598377 3644 ntBASIC5.36□□□□□ -1.55
LTBRP36941 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms