Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RSU1P3-201ENST00000412878 835 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.55□□□□□ -1.52
CNGA1P29973 AC073136.2-201ENST00000417282 849 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.55□□□□□ -1.52
CNGA1P29973 AC016907.1-201ENST00000419483 435 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC244035.1-201ENST00000430042 390 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.55□□□□□ -1.52
CNGA1P29973 BMS1P19-201ENST00000433925 393 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 KCTD10P1-201ENST00000434203 625 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.55□□□□□ -1.52
CNGA1P29973 NPM1P33-201ENST00000438918 872 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.55□□□□□ -1.52
CNGA1P29973 AC004980.3-201ENST00000447046 365 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 RNA5SP103-201ENST00000459503 118 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC007537.2-201ENST00000472093 511 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNGA1P29973 HMGB1P21-201ENST00000502313 581 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 NIFKP7-201ENST00000503365 834 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC114981.1-201ENST00000503897 678 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 RN7SKP122-201ENST00000515923 296 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.55□□□□□ -1.52
CNGA1P29973 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.55□□□□□ -1.52
CNGA1P29973 AC022790.1-201ENST00000522872 204 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.55□□□□□ -1.52
CNGA1P29973 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.55□□□□□ -1.52
CNGA1P29973 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.55□□□□□ -1.52
CNGA1P29973 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.55□□□□□ -1.52
CNGA1P29973 AC012435.1-202ENST00000568772 240 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.55□□□□□ -1.52
CNGA1P29973 AP005119.2-201ENST00000579735 1105 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AF131215.7-201ENST00000602443 707 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC018695.5-201ENST00000605872 315 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC092653.1-201ENST00000608509 531 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.55□□□□□ -1.52
CNGA1P29973 Z69908.1-201ENST00000622603 247 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 AC139792.2-201ENST00000624218 587 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.55□□□□□ -1.52
CNGA1P29973 AC104623.2-202ENST00000623477 4002 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNGA1P29973 NCLP2-201ENST00000416078 1462 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNGA1P29973 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNGA1P29973 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CNGA1P29973 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNGA1P29973 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.55□□□□□ -1.52
CNGA1P29973 AL731532.2-201ENST00000623542 1953 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.55□□□□□ -1.52
CNGA1P29973 SMG1P4-204ENST00000523028 4131 ntBASIC5.55□□□□□ -1.52
CNGA1P29973 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CNGA1P29973 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CNGA1P29973 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 U3.32-201ENST00000408116 212 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.54□□□□□ -1.52
CNGA1P29973 Z99497.1-201ENST00000421282 135 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AL138785.1-201ENST00000425821 331 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 RPL23AP1-201ENST00000428990 471 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AC129850.1-201ENST00000436203 508 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.54□□□□□ -1.52
CNGA1P29973 AC016831.4-201ENST00000438302 307 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 RPL7AP61-201ENST00000443410 636 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.54□□□□□ -1.52
CNGA1P29973 AC009961.3-201ENST00000449832 765 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AC104073.1-201ENST00000451988 151 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.54□□□□□ -1.52
CNGA1P29973 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.54□□□□□ -1.52
CNGA1P29973 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.54□□□□□ -1.52
CNGA1P29973 AC090013.1-201ENST00000485147 480 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.54□□□□□ -1.52
CNGA1P29973 AC093840.1-201ENST00000511599 336 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AC008802.1-201ENST00000519121 791 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AC106038.2-201ENST00000520706 568 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AL121766.1-201ENST00000547436 487 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.54□□□□□ -1.52
CNGA1P29973 LARP7P2-201ENST00000575306 125 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 RN7SL802P-201ENST00000577858 299 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.54□□□□□ -1.52
CNGA1P29973 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.54□□□□□ -1.52
CNGA1P29973 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.54□□□□□ -1.52
CNGA1P29973 FAM157B-203ENST00000639350 358 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.54□□□□□ -1.52
CNGA1P29973 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.54□□□□□ -1.52
CNGA1P29973 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNGA1P29973 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CNGA1P29973 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.54□□□□□ -1.52
CNGA1P29973 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.54□□□□□ -1.52
CNGA1P29973 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CNGA1P29973 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNGA1P29973 ZNF833P-201ENST00000424938 1494 ntBASIC5.53□□□□□ -1.52
CNGA1P29973 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms