Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC004972.1-201ENST00000623934 2209 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DMAP28067 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DMAP28067 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AC073429.2-201ENST00000569694 1444 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 RNA5SP97-201ENST00000365006 84 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 RNU6-398P-201ENST00000384143 109 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 OR51AB1P-201ENST00000429046 620 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 AL590103.1-201ENST00000434488 307 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 U3.44-201ENST00000458938 192 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 OR9M1P-201ENST00000459641 921 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 RN7SL610P-201ENST00000463845 291 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 RPS27AP1-201ENST00000475545 471 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 AC012181.1-201ENST00000479895 423 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 RN7SL283P-201ENST00000489055 303 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AC138701.1-201ENST00000524329 714 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 MTCYBP41-201ENST00000528913 1123 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 AL121766.1-201ENST00000547436 487 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 POLR2KP1-201ENST00000553226 168 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AL163153.1-201ENST00000554223 283 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 TRAV15-201ENST00000556680 249 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AL357559.1-201ENST00000622228 274 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 CASC19-261ENST00000641853 1638 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DMAP28067 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DMAP28067 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DMAP28067 AC002546.1-201ENST00000588041 2504 ntBASIC3.14□□□□□ -1.91
HLA-DMAP28067 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DMAP28067 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DMAP28067 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DMAP28067 U3.11-201ENST00000364476 212 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 RNA5SP424-201ENST00000390988 115 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 BTBD10P2-201ENST00000404779 676 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC068533.1-201ENST00000418542 415 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 COX6CP15-201ENST00000426313 211 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DMAP28067 MRPS18BP2-201ENST00000434310 759 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 MRPS33P4-201ENST00000434892 317 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AL356276.2-201ENST00000435919 558 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AL772161.1-201ENST00000439130 476 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 RPL7P52-201ENST00000449200 742 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC105137.1-201ENST00000484355 562 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 HMGB1P38-201ENST00000490557 577 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 FABP5P6-201ENST00000510588 409 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC022784.5-201ENST00000522241 437 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC051619.2-201ENST00000559063 397 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 RN7SL600P-201ENST00000581811 299 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DMAP28067 SNORA62.6-201ENST00000606322 83 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AC093908.1-201ENST00000623125 8092 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DMAP28067 AL079305.1-201ENST00000623159 3008 ntBASIC3.13□□□□□ -1.91
HLA-DMAP28067 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DMAP28067 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DMAP28067 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DMAP28067 SAGE4P-201ENST00000442271 3381 ntBASIC3.12□□□□□ -1.91
HLA-DMAP28067 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DMAP28067 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DMAP28067 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.12□□□□□ -1.91
HLA-DMAP28067 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
HLA-DMAP28067 RNU2-6P-201ENST00000411404 190 ntBASIC3.12□□□□□ -1.91
HLA-DMAP28067 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.12□□□□□ -1.91
HLA-DMAP28067 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DMAP28067 RNF19BPX-201ENST00000426224 625 ntBASIC3.12□□□□□ -1.91
HLA-DMAP28067 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DMAP28067 ISCA1P2-201ENST00000438679 421 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms