Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC245100.7-201ENST00000609678 442 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.8□□□□□ -1.8
XRCC1P18887 AC084824.5-201ENST00000612009 413 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 MIR8084-201ENST00000614105 89 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AC243756.2-201ENST00000618406 463 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AC073569.3-201ENST00000619055 682 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AL356863.1-201ENST00000623378 1080 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.8□□□□□ -1.8
XRCC1P18887 AC132825.7-201ENST00000638744 335 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.8□□□□□ -1.8
XRCC1P18887 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.8□□□□□ -1.8
XRCC1P18887 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
XRCC1P18887 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.8□□□□□ -1.8
XRCC1P18887 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
XRCC1P18887 AC046144.1-201ENST00000478559 1853 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
XRCC1P18887 AL139811.1-201ENST00000424779 2299 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
XRCC1P18887 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
XRCC1P18887 HNRNPDP2-201ENST00000406475 478 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
XRCC1P18887 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AC023347.2-201ENST00000433994 462 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.79□□□□□ -1.8
XRCC1P18887 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AC007537.2-201ENST00000472093 511 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 CYCSP20-201ENST00000473154 315 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AC011037.1-201ENST00000483964 558 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 RN7SKP82-201ENST00000516786 223 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 RN7SKP283-201ENST00000517197 270 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AC023632.4-201ENST00000517783 191 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.79□□□□□ -1.8
XRCC1P18887 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.79□□□□□ -1.8
XRCC1P18887 ATP5F1P7-201ENST00000567330 760 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AC083899.3-201ENST00000603413 594 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AL713922.2-201ENST00000619384 716 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 AF001550.2-201ENST00000636643 217 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
XRCC1P18887 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.79□□□□□ -1.8
XRCC1P18887 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
XRCC1P18887 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
XRCC1P18887 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
XRCC1P18887 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
XRCC1P18887 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
XRCC1P18887 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 U1.1-201ENST00000384101 164 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 SNORA51.12-201ENST00000384448 134 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 HSPE1P8-201ENST00000406997 288 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 RNU6ATAC-201ENST00000408749 126 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 RN7SKP156-201ENST00000410308 342 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 SNORA57.3-201ENST00000411095 141 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 RPL30P2-201ENST00000414021 291 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 UBE2D3P3-201ENST00000426992 425 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 SKP1P1-201ENST00000438081 489 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.78□□□□□ -1.8
XRCC1P18887 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 RANP8-201ENST00000444720 713 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 Z95327.1-201ENST00000446082 482 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 RPS17P13-201ENST00000448974 407 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 MTCO2P9-201ENST00000503214 694 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 AC104108.1-201ENST00000509930 412 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 AC121161.1-201ENST00000510606 652 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.78□□□□□ -1.8
XRCC1P18887 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 C1DP5-201ENST00000525775 383 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 AC113192.3-201ENST00000529152 742 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 AP003717.3-201ENST00000544832 1180 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 AC091515.1-201ENST00000548110 679 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.78□□□□□ -1.8
XRCC1P18887 AC012254.4-201ENST00000588843 273 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.78□□□□□ -1.8
XRCC1P18887 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 AL392112.1-201ENST00000605115 829 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms