Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.2□□□□□ -1.42
LIG1P18858 MIR4307-201ENST00000582802 84 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.2□□□□□ -1.42
LIG1P18858 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 AL589674.2-201ENST00000604304 337 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AL035413.2-201ENST00000604801 525 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AC018695.5-201ENST00000605872 315 ntBASIC6.2□□□□□ -1.42
LIG1P18858 AC244107.2-201ENST00000611773 76 ntBASIC6.2□□□□□ -1.42
LIG1P18858 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 uc_338.7-201ENST00000621834 124 ntBASIC6.2□□□□□ -1.42
LIG1P18858 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIG1P18858 AC009313.2-201ENST00000417893 1941 ntBASIC6.2□□□□□ -1.42
LIG1P18858 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LIG1P18858 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
LIG1P18858 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIG1P18858 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LIG1P18858 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIG1P18858 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.2□□□□□ -1.42
LIG1P18858 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LIG1P18858 OR4G11P-202ENST00000642116 1414 ntBASIC6.19□□□□□ -1.42
LIG1P18858 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 Y_RNA.162-201ENST00000363683 102 ntBASIC6.19□□□□□ -1.42
LIG1P18858 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
LIG1P18858 Y_RNA.460-201ENST00000384255 102 ntBASIC6.19□□□□□ -1.42
LIG1P18858 SNORA16A-201ENST00000384342 137 ntBASIC6.19□□□□□ -1.42
LIG1P18858 U3.25-201ENST00000391209 220 ntBASIC6.19□□□□□ -1.42
LIG1P18858 SNRPEP2-201ENST00000397592 279 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AL390316.1-201ENST00000406279 553 ntBASIC6.19□□□□□ -1.42
LIG1P18858 VN1R8P-201ENST00000407739 893 ntBASIC6.19□□□□□ -1.42
LIG1P18858 MIR1302-11-201ENST00000408051 138 ntBASIC6.19□□□□□ -1.42
LIG1P18858 MIR1302-9-201ENST00000408365 138 ntBASIC6.19□□□□□ -1.42
LIG1P18858 MIR1302-10-201ENST00000408734 138 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.19□□□□□ -1.42
LIG1P18858 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.19□□□□□ -1.42
LIG1P18858 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC012075.1-201ENST00000436549 580 ntBASIC6.19□□□□□ -1.42
LIG1P18858 SKP1P1-201ENST00000438081 489 ntBASIC6.19□□□□□ -1.42
LIG1P18858 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.19□□□□□ -1.42
LIG1P18858 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.19□□□□□ -1.42
LIG1P18858 PRPF38AP1-201ENST00000451976 933 ntBASIC6.19□□□□□ -1.42
LIG1P18858 MTCO3P20-201ENST00000454926 688 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC022364.2-201ENST00000457963 554 ntBASIC6.19□□□□□ -1.42
LIG1P18858 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.19□□□□□ -1.42
LIG1P18858 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.19□□□□□ -1.42
LIG1P18858 RN7SL466P-201ENST00000497546 295 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC111000.3-201ENST00000508057 576 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC093809.1-201ENST00000509155 340 ntBASIC6.19□□□□□ -1.42
LIG1P18858 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 FGF7P4-201ENST00000509595 295 ntBASIC6.19□□□□□ -1.42
LIG1P18858 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LIG1P18858 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.19□□□□□ -1.42
LIG1P18858 Y_RNA.675-201ENST00000516389 149 ntBASIC6.19□□□□□ -1.42
LIG1P18858 RN7SKP99-201ENST00000517028 307 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.19□□□□□ -1.42
LIG1P18858 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LIG1P18858 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.19□□□□□ -1.42
LIG1P18858 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 AP003034.1-201ENST00000534621 422 ntBASIC6.19□□□□□ -1.42
LIG1P18858 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 AC040958.1-201ENST00000561102 201 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.19□□□□□ -1.42
LIG1P18858 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.19□□□□□ -1.42
LIG1P18858 PRPF19P1-201ENST00000584766 898 ntBASIC6.19□□□□□ -1.42
LIG1P18858 NRBF2P1-201ENST00000587407 859 ntBASIC6.19□□□□□ -1.42
LIG1P18858 BNIP3P23-201ENST00000599655 511 ntBASIC6.19□□□□□ -1.42
LIG1P18858 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.19□□□□□ -1.42
LIG1P18858 MIR1302-2-201ENST00000607096 138 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AL136295.6-201ENST00000610486 658 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LIG1P18858 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 ASNSP1-204ENST00000641977 1664 ntBASIC6.19□□□□□ -1.42
LIG1P18858 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIG1P18858 AC006378.2-201ENST00000623178 2476 ntBASIC6.19□□□□□ -1.42
LIG1P18858 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.18□□□□□ -1.42
LIG1P18858 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LIG1P18858 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LIG1P18858 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIG1P18858 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LIG1P18858 AC011755.1-201ENST00000623763 2049 ntBASIC6.18□□□□□ -1.42
LIG1P18858 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LIG1P18858 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LIG1P18858 Y_RNA.142-201ENST00000363491 102 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms