Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 AL137072.1-201ENST00000603444 466 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 AC013468.1-201ENST00000608680 598 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 AL360219.1-201ENST00000610230 366 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC015908.5-201ENST00000623289 343 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXC6P09630 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXC6P09630 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC6P09630 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC6P09630 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC6P09630 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC6P09630 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC6P09630 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC6P09630 SNORD116.1-201ENST00000365628 92 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC6P09630 RNU6-244P-201ENST00000391028 104 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AL034403.1-201ENST00000399414 885 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 RN7SKP156-201ENST00000410308 342 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 HSFY4P-201ENST00000415994 1181 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC6P09630 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC6P09630 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC6P09630 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC6P09630 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC6P09630 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC6P09630 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.61□□□□□ -1.67
HOXC6P09630 AC023512.1-201ENST00000444513 499 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC6P09630 CASP3P1-201ENST00000446037 609 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 RAD23BP3-201ENST00000454157 1152 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 NECAP1P2-201ENST00000455668 727 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AP000942.1-201ENST00000463969 747 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AC126121.1-201ENST00000482313 553 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AC006499.5-201ENST00000505037 514 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AC026726.1-201ENST00000512859 601 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AC109635.6-201ENST00000525487 1113 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 MTND2P26-201ENST00000528255 1029 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AC100770.1-201ENST00000532310 322 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC6P09630 AC063950.1-201ENST00000552036 308 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC6P09630 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC6P09630 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC6P09630 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC6P09630 AL020997.3-201ENST00000602843 359 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AL158042.1-201ENST00000605338 460 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 TUSC7.1-201ENST00000610969 165 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 AC092140.2-201ENST00000618027 521 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 FP236240.3-201ENST00000623061 327 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC6P09630 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC6P09630 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
HOXC6P09630 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HOXC6P09630 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC6P09630 RLIMP2-201ENST00000427891 1563 ntBASIC4.61□□□□□ -1.67
HOXC6P09630 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC6P09630 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXC6P09630 AC021242.1-201ENST00000507315 2035 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXC6P09630 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC6P09630 OR4A15-201ENST00000314706 1035 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 ANKRD36P1-201ENST00000344424 659 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HOXC6P09630 RNA5SP27-201ENST00000363839 119 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 RNU4-51P-201ENST00000364206 140 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 U8.11-201ENST00000384699 133 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 U8.12-201ENST00000384701 133 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 MIR30B-201ENST00000384850 88 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HOXC6P09630 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC6P09630 AL356131.1-201ENST00000405826 414 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 HMGB3P31-201ENST00000413333 595 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AC011233.1-201ENST00000422812 283 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 RPP40P1-201ENST00000426762 456 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 SKP1P3-201ENST00000429280 487 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 AL358472.1-201ENST00000431295 329 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AC093716.1-201ENST00000435923 377 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AL008629.1-201ENST00000438615 184 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AL450263.2-201ENST00000439400 589 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXC6P09630 EXTL2P1-201ENST00000446218 416 ntBASIC4.6□□□□□ -1.67
HOXC6P09630 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC6P09630 U8.18-201ENST00000459285 133 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms