Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
COL2A1P02458 AL645568.2-201ENST00000432815 1337 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 GNG5P1-201ENST00000255500 204 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.18□□□□□ -1.74
COL2A1P02458 UBA52P6-201ENST00000399822 382 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 HNRNPDP2-201ENST00000406475 478 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 MTCO2P21-201ENST00000419780 677 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 MTCO2P20-201ENST00000437339 673 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.18□□□□□ -1.74
COL2A1P02458 MTND1P33-201ENST00000446251 917 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 U3.44-201ENST00000458938 192 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 RN7SL594P-201ENST00000470590 287 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 RPS3AP14-201ENST00000483907 780 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 RPL21P13-201ENST00000488305 481 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL2A1P02458 AC112673.1-201ENST00000513168 575 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.18□□□□□ -1.74
COL2A1P02458 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 AL049874.4-201ENST00000557593 255 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 AL671309.1-201ENST00000603750 544 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AL445493.3-201ENST00000619568 477 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AC026585.1-201ENST00000619582 524 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.18□□□□□ -1.74
COL2A1P02458 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.18□□□□□ -1.74
COL2A1P02458 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.18□□□□□ -1.74
COL2A1P02458 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 AL356057.1-202ENST00000402263 756 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AL589655.1-201ENST00000405398 482 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AC005005.2-201ENST00000420779 380 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 RPL7P44-201ENST00000424827 742 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 AL591719.1-201ENST00000444669 744 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 HMGB3P22-202ENST00000451823 572 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 RPL7P23-201ENST00000493874 747 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 HMGB1P19-201ENST00000517578 577 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.18□□□□□ -1.74
COL2A1P02458 AC104115.2-201ENST00000523026 687 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL2A1P02458 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.18□□□□□ -1.74
COL2A1P02458 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 AC023824.3-201ENST00000569003 562 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 AL139395.1-201ENST00000603662 160 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.18□□□□□ -1.74
COL2A1P02458 AP000676.4-201ENST00000624659 623 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 AL732372.2-225ENST00000642124 456 ntBASIC4.18□□□□□ -1.74
COL2A1P02458 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL2A1P02458 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL2A1P02458 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
COL2A1P02458 CDY11P-201ENST00000447168 1651 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
COL2A1P02458 NR1H5P-201ENST00000452683 1377 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL2A1P02458 NACA3P-201ENST00000359690 648 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 MTCO2P31-201ENST00000402702 684 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 RNU6-564P-201ENST00000410983 104 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 LUZP4P1-201ENST00000415420 344 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC017079.2-201ENST00000416102 485 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC106883.1-201ENST00000418805 562 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC016907.1-201ENST00000419483 435 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.17□□□□□ -1.74
COL2A1P02458 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.17□□□□□ -1.74
COL2A1P02458 BX119904.1-201ENST00000432026 348 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.17□□□□□ -1.74
COL2A1P02458 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.17□□□□□ -1.74
COL2A1P02458 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.17□□□□□ -1.74
COL2A1P02458 AC010469.1-201ENST00000463864 576 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC023598.1-201ENST00000472521 361 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC004069.2-201ENST00000505438 1114 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.17□□□□□ -1.74
COL2A1P02458 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.17□□□□□ -1.74
COL2A1P02458 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.17□□□□□ -1.74
COL2A1P02458 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.17□□□□□ -1.74
COL2A1P02458 AC012414.2-201ENST00000559474 187 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.17□□□□□ -1.74
COL2A1P02458 AL358072.1-201ENST00000604156 575 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC015813.4-201ENST00000610469 179 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC084824.4-201ENST00000620106 731 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC093849.1-201ENST00000563631 2209 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 AC092435.3-201ENST00000565538 3654 ntBASIC4.17□□□□□ -1.74
COL2A1P02458 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL2A1P02458 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL2A1P02458 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.16□□□□□ -1.74
COL2A1P02458 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COL2A1P02458 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms