Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RPL7P47-201ENST00000497299 556 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.87□□□□□ -1.79
COL1A1P02452 OR10D4P-201ENST00000525892 951 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.87□□□□□ -1.79
COL1A1P02452 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.87□□□□□ -1.79
COL1A1P02452 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL1A1P02452 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.87□□□□□ -1.79
COL1A1P02452 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.87□□□□□ -1.79
COL1A1P02452 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.87□□□□□ -1.79
COL1A1P02452 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.87□□□□□ -1.79
COL1A1P02452 Z82195.1-201ENST00000604558 398 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 AC074140.1-201ENST00000621617 208 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 AC018692.3-201ENST00000623929 123 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 BMS1P21-201ENST00000634565 365 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL1A1P02452 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL1A1P02452 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
COL1A1P02452 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL1A1P02452 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.87□□□□□ -1.79
COL1A1P02452 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.87□□□□□ -1.79
COL1A1P02452 AC007496.3-201ENST00000624987 3443 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
COL1A1P02452 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL1A1P02452 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL1A1P02452 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL1A1P02452 AC104297.1-201ENST00000393779 870 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 UBE2V1P2-201ENST00000397758 440 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 BX890604.2-201ENST00000427883 474 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL1A1P02452 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.86□□□□□ -1.79
COL1A1P02452 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL1A1P02452 AC022080.3-201ENST00000544433 482 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 AC087888.1-201ENST00000550884 1254 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.86□□□□□ -1.79
COL1A1P02452 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL1A1P02452 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.86□□□□□ -1.79
COL1A1P02452 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.86□□□□□ -1.79
COL1A1P02452 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.86□□□□□ -1.79
COL1A1P02452 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL1A1P02452 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
COL1A1P02452 OR5H2-201ENST00000355273 945 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
COL1A1P02452 RNU4-44P-201ENST00000363050 141 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 RNA5SP31-201ENST00000411144 127 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.86□□□□□ -1.79
COL1A1P02452 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.86□□□□□ -1.79
COL1A1P02452 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.86□□□□□ -1.79
COL1A1P02452 AC118465.1-201ENST00000513820 1271 ntBASIC3.86□□□□□ -1.79
COL1A1P02452 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.86□□□□□ -1.79
COL1A1P02452 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL1A1P02452 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL1A1P02452 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.85□□□□□ -1.79
COL1A1P02452 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL1A1P02452 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL1A1P02452 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COL1A1P02452 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL1A1P02452 HSPA8P17-201ENST00000427029 1382 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 RPL5P18-201ENST00000406671 891 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 RNU6-55P-201ENST00000411092 107 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 RNU6-954P-201ENST00000411355 107 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.85□□□□□ -1.79
COL1A1P02452 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.85□□□□□ -1.79
COL1A1P02452 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.85□□□□□ -1.79
COL1A1P02452 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.85□□□□□ -1.79
COL1A1P02452 AC105918.1-201ENST00000474399 838 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.85□□□□□ -1.79
COL1A1P02452 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.85□□□□□ -1.79
COL1A1P02452 AC090281.1-201ENST00000523019 276 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.85□□□□□ -1.79
COL1A1P02452 AL139174.1-201ENST00000531489 886 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 AC013412.1-201ENST00000610687 192 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 uc_338.1-201ENST00000612113 180 ntBASIC3.85□□□□□ -1.79
COL1A1P02452 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.85□□□□□ -1.79
COL1A1P02452 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.85□□□□□ -1.79
COL1A1P02452 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL1A1P02452 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL1A1P02452 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL1A1P02452 MTCO1P24-201ENST00000515438 1558 ntBASIC3.84□□□□□ -1.79
COL1A1P02452 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL1A1P02452 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL1A1P02452 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.84□□□□□ -1.8
COL1A1P02452 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.84□□□□□ -1.8
COL1A1P02452 NDUFB9P3-201ENST00000521269 501 ntBASIC3.84□□□□□ -1.8
COL1A1P02452 AP001636.2-201ENST00000525517 696 ntBASIC3.84□□□□□ -1.8
COL1A1P02452 RPL12P50-201ENST00000603116 116 ntBASIC3.84□□□□□ -1.8
COL1A1P02452 PRELID3BP8-201ENST00000604148 295 ntBASIC3.84□□□□□ -1.8
COL1A1P02452 IGHV3-29-201ENST00000604817 344 ntBASIC3.84□□□□□ -1.8
COL1A1P02452 AL365400.2-201ENST00000605604 902 ntBASIC3.84□□□□□ -1.8
COL1A1P02452 AL590240.3-201ENST00000621416 943 ntBASIC3.84□□□□□ -1.8
COL1A1P02452 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL1A1P02452 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL1A1P02452 RPS4XP5-202ENST00000449995 1334 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.83□□□□□ -1.8
COL1A1P02452 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL1A1P02452 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL1A1P02452 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL1A1P02452 AC018529.3-201ENST00000624212 2254 ntBASIC3.83□□□□□ -1.8
COL1A1P02452 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL1A1P02452 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL1A1P02452 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms