Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC025627.2-201ENST00000576220 160 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFBP01127 MTATP6P2-201ENST00000603319 678 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 MIR8084-201ENST00000614105 89 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 AC006249.1-201ENST00000621223 471 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 C2orf27A-204ENST00000623058 969 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 AC006065.5-201ENST00000623427 349 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.07□□□□□ -1.76
PDGFBP01127 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFBP01127 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PDGFBP01127 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFBP01127 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFBP01127 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFBP01127 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFBP01127 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PDGFBP01127 MTCO1P6-201ENST00000481192 1384 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFBP01127 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFBP01127 SNORA60-201ENST00000362396 134 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 RNA5SP267-201ENST00000364893 126 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PDGFBP01127 MIR490-201ENST00000384865 128 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 MIR525-201ENST00000384978 85 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AL355143.1-201ENST00000407101 841 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 SNORA3.3-201ENST00000408712 125 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AC008173.1-201ENST00000418901 264 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AC236972.1-201ENST00000433225 199 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 MOB1AP2-201ENST00000446060 614 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFBP01127 SNRPGP5-201ENST00000456003 220 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 snoU13.7-201ENST00000459220 104 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AC087385.1-201ENST00000475062 312 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.06□□□□□ -1.76
PDGFBP01127 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFBP01127 RN7SKP277-201ENST00000516895 283 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFBP01127 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFBP01127 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFBP01127 MTND2P26-201ENST00000528255 1029 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFBP01127 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFBP01127 AC095057.3-201ENST00000567102 1157 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFBP01127 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFBP01127 AC096586.1-201ENST00000610267 561 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 AC006213.4-201ENST00000616184 634 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFBP01127 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFBP01127 AC132825.7-201ENST00000638744 335 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFBP01127 AC087190.4-201ENST00000574616 8334 ntBASIC4.06□□□□□ -1.76
PDGFBP01127 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PDGFBP01127 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFBP01127 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PDGFBP01127 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFBP01127 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFBP01127 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFBP01127 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.05□□□□□ -1.76
PDGFBP01127 MTND5P3-201ENST00000438536 1800 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFBP01127 MFSD8-213ENST00000641134 1327 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PDGFBP01127 MIR1179-201ENST00000408703 91 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.05□□□□□ -1.76
PDGFBP01127 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFBP01127 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFBP01127 Z97055.1-201ENST00000419730 712 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AL606495.1-201ENST00000422100 813 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AC092170.1-201ENST00000440211 356 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 BX276092.4-201ENST00000452056 248 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 BX248409.1-201ENST00000455497 255 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.05□□□□□ -1.76
PDGFBP01127 RPL21P47-201ENST00000483696 477 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFBP01127 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AC104629.1-201ENST00000494226 508 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFBP01127 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFBP01127 FTH1P9-201ENST00000513251 355 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AC018797.3-201ENST00000513388 1241 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFBP01127 OR5B10P-201ENST00000532869 642 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFBP01127 AC104072.1-201ENST00000568817 668 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 MIR4513-201ENST00000581077 86 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 VN1R88P-201ENST00000596787 292 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AC114878.2-201ENST00000604863 1251 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AC245100.7-201ENST00000609678 442 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 AC073530.2-201ENST00000623987 261 ntBASIC4.05□□□□□ -1.76
PDGFBP01127 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFBP01127 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFBP01127 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFBP01127 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFBP01127 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFBP01127 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFBP01127 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFBP01127 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms