Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU5A-8P-201ENST00000364102 114 ntBASIC7.09□□□□□ -1.27
RNF40O75150 RNU6-641P-201ENST00000384006 107 ntBASIC7.09□□□□□ -1.27
RNF40O75150 MIR450B-201ENST00000401182 78 ntBASIC7.09□□□□□ -1.27
RNF40O75150 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 ELOCP20-201ENST00000422460 345 ntBASIC7.09□□□□□ -1.27
RNF40O75150 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF40O75150 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 AC098831.1-201ENST00000440661 216 ntBASIC7.09□□□□□ -1.27
RNF40O75150 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 AC011005.2-201ENST00000487324 359 ntBASIC7.09□□□□□ -1.27
RNF40O75150 RNU6-488P-201ENST00000515918 99 ntBASIC7.09□□□□□ -1.27
RNF40O75150 RNA5SP384-201ENST00000516615 116 ntBASIC7.09□□□□□ -1.27
RNF40O75150 AC011979.2-201ENST00000527568 352 ntBASIC7.09□□□□□ -1.27
RNF40O75150 OR52K3P-201ENST00000531655 943 ntBASIC7.09□□□□□ -1.27
RNF40O75150 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF40O75150 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 AC068446.3-201ENST00000555285 382 ntBASIC7.09□□□□□ -1.27
RNF40O75150 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF40O75150 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF40O75150 MTND4LP5-201ENST00000605152 292 ntBASIC7.09□□□□□ -1.27
RNF40O75150 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF40O75150 AC127459.3-201ENST00000624328 466 ntBASIC7.09□□□□□ -1.27
RNF40O75150 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RNF40O75150 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF40O75150 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
RNF40O75150 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF40O75150 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF40O75150 MAPK10-357ENST00000641831 2858 ntBASIC7.09□□□□□ -1.27
RNF40O75150 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF40O75150 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
RNF40O75150 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RNF40O75150 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
RNF40O75150 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RNF40O75150 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF40O75150 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF40O75150 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
RNF40O75150 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF40O75150 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF40O75150 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF40O75150 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RNF40O75150 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF40O75150 RPS17P17-201ENST00000419392 409 ntBASIC7.08□□□□□ -1.28
RNF40O75150 AC128677.1-201ENST00000436016 442 ntBASIC7.08□□□□□ -1.28
RNF40O75150 SDHCP3-201ENST00000445371 506 ntBASIC7.08□□□□□ -1.28
RNF40O75150 CBX1P2-201ENST00000453841 458 ntBASIC7.08□□□□□ -1.28
RNF40O75150 HMGN3P1-201ENST00000453847 193 ntBASIC7.08□□□□□ -1.28
RNF40O75150 AC011476.1-201ENST00000466725 307 ntBASIC7.08□□□□□ -1.28
RNF40O75150 AP000893.1-201ENST00000474462 794 ntBASIC7.08□□□□□ -1.28
RNF40O75150 HMGB1P35-201ENST00000503360 598 ntBASIC7.08□□□□□ -1.28
RNF40O75150 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF40O75150 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 AC087752.2-201ENST00000521219 281 ntBASIC7.08□□□□□ -1.28
RNF40O75150 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF40O75150 HSBP1P1-201ENST00000555205 166 ntBASIC7.08□□□□□ -1.28
RNF40O75150 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 AC012433.1-201ENST00000588916 398 ntBASIC7.08□□□□□ -1.28
RNF40O75150 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 HMGB2P1-201ENST00000591146 634 ntBASIC7.08□□□□□ -1.28
RNF40O75150 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF40O75150 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 ATP5A1P2-202ENST00000616464 443 ntBASIC7.08□□□□□ -1.28
RNF40O75150 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF40O75150 AC245100.2-201ENST00000454544 1679 ntBASIC7.08□□□□□ -1.28
RNF40O75150 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF40O75150 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF40O75150 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
RNF40O75150 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RNF40O75150 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF40O75150 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF40O75150 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF40O75150 ANKRD36BP1-201ENST00000358576 1779 ntBASIC7.08□□□□□ -1.28
RNF40O75150 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF40O75150 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF40O75150 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF40O75150 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF40O75150 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF40O75150 AC078880.4-201ENST00000617627 1749 ntBASIC7.07□□□□□ -1.28
RNF40O75150 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF40O75150 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF40O75150 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF40O75150 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RNF40O75150 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RNF40O75150 SNORD50B-201ENST00000364995 70 ntBASIC7.07□□□□□ -1.28
RNF40O75150 Y_RNA.539-201ENST00000384635 107 ntBASIC7.07□□□□□ -1.28
RNF40O75150 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RNF40O75150 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF40O75150 CBX1P3-201ENST00000413296 527 ntBASIC7.07□□□□□ -1.28
RNF40O75150 RAC1P3-201ENST00000416129 580 ntBASIC7.07□□□□□ -1.28
RNF40O75150 BX284632.2-201ENST00000421091 399 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AC007568.1-201ENST00000422912 471 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms