Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNA5SP385-201ENST00000515947 110 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.58□□□□□ -2
SSSCA1O60232 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.58□□□□□ -2
SSSCA1O60232 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.58□□□□□ -2
SSSCA1O60232 AP004242.1-201ENST00000533701 349 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.58□□□□□ -2
SSSCA1O60232 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.58□□□□□ -2
SSSCA1O60232 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.58□□□□□ -2
SSSCA1O60232 AC092868.3-201ENST00000560515 784 ntBASIC2.58□□□□□ -2
SSSCA1O60232 MIR4506-201ENST00000584693 77 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AC104785.1-201ENST00000603220 588 ntBASIC2.58□□□□□ -2
SSSCA1O60232 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.58□□□□□ -2
SSSCA1O60232 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.58□□□□□ -2
SSSCA1O60232 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.58□□□□□ -2
SSSCA1O60232 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.58□□□□□ -2
SSSCA1O60232 AL672296.1-201ENST00000427780 2158 ntBASIC2.58□□□□□ -2
SSSCA1O60232 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.58□□□□□ -2
SSSCA1O60232 DCAF13P3-201ENST00000561147 1334 ntBASIC2.58□□□□□ -2
SSSCA1O60232 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.58□□□□□ -2
SSSCA1O60232 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 AF117829.1-206ENST00000621883 3802 ntBASIC2.58□□□□□ -2
SSSCA1O60232 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 AC118273.1-201ENST00000525324 3006 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AC017002.4-201ENST00000604721 1525 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AL365440.1-201ENST00000436135 2167 ntBASIC2.57□□□□□ -2
SSSCA1O60232 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.57□□□□□ -2
SSSCA1O60232 RPL32P3-201ENST00000359025 275 ntBASIC2.57□□□□□ -2
SSSCA1O60232 RNU6-304P-201ENST00000364855 107 ntBASIC2.57□□□□□ -2
SSSCA1O60232 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SSSCA1O60232 MIR92A2-201ENST00000385299 75 ntBASIC2.57□□□□□ -2
SSSCA1O60232 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.57□□□□□ -2
SSSCA1O60232 RPL31P52-201ENST00000407532 367 ntBASIC2.57□□□□□ -2
SSSCA1O60232 RAB9AP4-201ENST00000415230 609 ntBASIC2.57□□□□□ -2
SSSCA1O60232 RPS27AP12-201ENST00000429552 465 ntBASIC2.57□□□□□ -2
SSSCA1O60232 AC016712.1-201ENST00000431088 378 ntBASIC2.57□□□□□ -2
SSSCA1O60232 ATP5JP1-201ENST00000431631 322 ntBASIC2.57□□□□□ -2
SSSCA1O60232 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.57□□□□□ -2
SSSCA1O60232 RPS15AP29-201ENST00000445539 400 ntBASIC2.57□□□□□ -2
SSSCA1O60232 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.57□□□□□ -2
SSSCA1O60232 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.57□□□□□ -2
SSSCA1O60232 RPL21P18-201ENST00000469899 480 ntBASIC2.57□□□□□ -2
SSSCA1O60232 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC2.57□□□□□ -2
SSSCA1O60232 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.57□□□□□ -2
SSSCA1O60232 CDH12P2-201ENST00000504393 298 ntBASIC2.57□□□□□ -2
SSSCA1O60232 HAUS1P1-201ENST00000505275 832 ntBASIC2.57□□□□□ -2
SSSCA1O60232 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.57□□□□□ -2
SSSCA1O60232 RN7SKP43-201ENST00000516173 320 ntBASIC2.57□□□□□ -2
SSSCA1O60232 IGKV2-26-201ENST00000518305 343 ntBASIC2.57□□□□□ -2
SSSCA1O60232 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.57□□□□□ -2
SSSCA1O60232 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.57□□□□□ -2
SSSCA1O60232 OR8R1P-201ENST00000543943 764 ntBASIC2.57□□□□□ -2
SSSCA1O60232 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.57□□□□□ -2
SSSCA1O60232 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.57□□□□□ -2
SSSCA1O60232 AC016877.3-201ENST00000606778 504 ntBASIC2.57□□□□□ -2
SSSCA1O60232 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.57□□□□□ -2
SSSCA1O60232 MIR6758-201ENST00000620653 63 ntBASIC2.57□□□□□ -2
SSSCA1O60232 AP003400.2-201ENST00000624036 666 ntBASIC2.57□□□□□ -2
SSSCA1O60232 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSSCA1O60232 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSSCA1O60232 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSSCA1O60232 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SSSCA1O60232 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SSSCA1O60232 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SSSCA1O60232 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSSCA1O60232 AL359837.1-201ENST00000381357 287 ntBASIC2.56□□□□□ -2
SSSCA1O60232 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.56□□□□□ -2
SSSCA1O60232 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.56□□□□□ -2
SSSCA1O60232 RPL30P3-201ENST00000424262 333 ntBASIC2.56□□□□□ -2
SSSCA1O60232 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.56□□□□□ -2
SSSCA1O60232 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSSCA1O60232 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.56□□□□□ -2
SSSCA1O60232 RPS12P18-201ENST00000442381 270 ntBASIC2.56□□□□□ -2
SSSCA1O60232 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.56□□□□□ -2
SSSCA1O60232 AC239367.2-201ENST00000447309 705 ntBASIC2.56□□□□□ -2
SSSCA1O60232 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.56□□□□□ -2
SSSCA1O60232 AP004217.1-201ENST00000480579 346 ntBASIC2.56□□□□□ -2
SSSCA1O60232 MTND4LP22-201ENST00000508209 276 ntBASIC2.56□□□□□ -2
SSSCA1O60232 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.56□□□□□ -2
SSSCA1O60232 RN7SKP13-201ENST00000515933 244 ntBASIC2.56□□□□□ -2
SSSCA1O60232 NPM1P35-201ENST00000533043 868 ntBASIC2.56□□□□□ -2
SSSCA1O60232 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.56□□□□□ -2
SSSCA1O60232 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.56□□□□□ -2
SSSCA1O60232 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.56□□□□□ -2
SSSCA1O60232 uc_338.25-201ENST00000613756 156 ntBASIC2.56□□□□□ -2
SSSCA1O60232 RNA5SP196-201ENST00000625967 102 ntBASIC2.56□□□□□ -2
SSSCA1O60232 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.56□□□□□ -2
SSSCA1O60232 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.56□□□□□ -2
SSSCA1O60232 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.56□□□□□ -2
SSSCA1O60232 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSSCA1O60232 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSSCA1O60232 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSSCA1O60232 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SSSCA1O60232 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSSCA1O60232 AP000567.1-201ENST00000406413 156 ntBASIC2.55□□□□□ -2
SSSCA1O60232 XKRYP4-201ENST00000414395 483 ntBASIC2.55□□□□□ -2
SSSCA1O60232 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.55□□□□□ -2
SSSCA1O60232 OR2B8P-201ENST00000432841 938 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms