Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 VN1R88P-201ENST00000596787 292 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AL031281.1-201ENST00000604049 488 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AL392112.1-201ENST00000605115 829 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.47□□□□□ -1.69
SMAD6O43541 MIR6798-201ENST00000612887 67 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SMAD6O43541 AC073968.1-201ENST00000618594 637 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.47□□□□□ -1.69
SMAD6O43541 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.69
SMAD6O43541 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SMAD6O43541 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SMAD6O43541 AL133243.3-201ENST00000617415 3004 ntBASIC4.46□□□□□ -1.69
SMAD6O43541 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SMAD6O43541 EIF2AP4-201ENST00000424793 1781 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC095050.2-201ENST00000510748 1458 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMAD6O43541 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SMAD6O43541 RNU1-87P-201ENST00000363727 170 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 SNORD65C-201ENST00000390962 71 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AL590084.2-201ENST00000401481 382 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC011933.1-201ENST00000413334 321 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 Z75741.2-201ENST00000417272 1167 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 BTF3P9-201ENST00000418784 283 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC023128.2-201ENST00000420880 1223 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 NPM1P24-201ENST00000428039 894 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.46□□□□□ -1.7
SMAD6O43541 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.46□□□□□ -1.7
SMAD6O43541 RPL23AP52-201ENST00000439311 478 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC114495.1-201ENST00000441274 436 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AP000936.2-201ENST00000447151 681 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 MRPL42P4-201ENST00000453267 443 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC005229.2-201ENST00000456995 399 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC116533.1-201ENST00000459748 321 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC109327.1-201ENST00000471666 403 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC010424.1-201ENST00000506336 297 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC010460.1-201ENST00000507087 466 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC008565.1-201ENST00000509046 885 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.46□□□□□ -1.7
SMAD6O43541 ATP1B1P1-201ENST00000509767 915 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.46□□□□□ -1.7
SMAD6O43541 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.46□□□□□ -1.7
SMAD6O43541 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC060788.1-201ENST00000521318 469 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.46□□□□□ -1.7
SMAD6O43541 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SMAD6O43541 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMAD6O43541 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.46□□□□□ -1.7
SMAD6O43541 NBEAP1-201ENST00000554452 979 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC023575.1-201ENST00000580510 358 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.46□□□□□ -1.7
SMAD6O43541 VN1R84P-201ENST00000593697 235 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.46□□□□□ -1.7
SMAD6O43541 AC113403.1-201ENST00000604910 193 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AL590392.1-201ENST00000604960 446 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC010201.1-201ENST00000605051 540 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC091979.2-201ENST00000607514 214 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC092653.1-201ENST00000608509 531 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AL158063.1-201ENST00000615349 536 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC015540.1-201ENST00000615828 501 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AL158196.1-201ENST00000616786 434 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 uc_338.13-201ENST00000618243 179 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.46□□□□□ -1.7
SMAD6O43541 AC018755.4-201ENST00000619715 454 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AC005086.4-201ENST00000623065 213 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AF246928.1-201ENST00000623768 87 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 AL359740.1-201ENST00000624340 592 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMAD6O43541 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.46□□□□□ -1.7
SMAD6O43541 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.46□□□□□ -1.7
SMAD6O43541 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMAD6O43541 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.46□□□□□ -1.7
SMAD6O43541 USP9YP4-201ENST00000424401 1745 ntBASIC4.46□□□□□ -1.7
SMAD6O43541 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
SMAD6O43541 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.45□□□□□ -1.7
SMAD6O43541 CR381670.1-201ENST00000624291 1693 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.45□□□□□ -1.7
SMAD6O43541 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMAD6O43541 RNU1-132P-201ENST00000364300 164 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.45□□□□□ -1.7
SMAD6O43541 MIR320B1-201ENST00000390209 79 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 SNORA40.2-201ENST00000390847 128 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC097374.1-203ENST00000400783 485 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.45□□□□□ -1.7
SMAD6O43541 SNORA11F-201ENST00000408237 128 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 RN7SKP167-201ENST00000411047 285 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.45□□□□□ -1.7
SMAD6O43541 ELOCP17-201ENST00000414751 326 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 OR4K6P-201ENST00000416478 897 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC006960.1-201ENST00000419980 153 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC062016.2-201ENST00000420950 676 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC246680.2-201ENST00000422106 389 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AC244035.1-201ENST00000430042 390 ntBASIC4.45□□□□□ -1.7
SMAD6O43541 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms