Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.56□□□□□ -1.68
MSI1O43347 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.56□□□□□ -1.68
MSI1O43347 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.56□□□□□ -1.68
MSI1O43347 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
MSI1O43347 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSI1O43347 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
MSI1O43347 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSI1O43347 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSI1O43347 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
MSI1O43347 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSI1O43347 AC139713.2-215ENST00000641428 5037 ntBASIC4.56□□□□□ -1.68
MSI1O43347 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
MSI1O43347 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSI1O43347 AC022031.1-201ENST00000585985 2593 ntBASIC4.56□□□□□ -1.68
MSI1O43347 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
MSI1O43347 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.55□□□□□ -1.68
MSI1O43347 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.55□□□□□ -1.68
MSI1O43347 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSI1O43347 AC009313.2-201ENST00000417893 1941 ntBASIC4.55□□□□□ -1.68
MSI1O43347 RNU6-553P-201ENST00000364047 96 ntBASIC4.55□□□□□ -1.68
MSI1O43347 RNU6-621P-201ENST00000364752 109 ntBASIC4.55□□□□□ -1.68
MSI1O43347 SNORD116-23-201ENST00000384645 92 ntBASIC4.55□□□□□ -1.68
MSI1O43347 RNU6-1300P-201ENST00000391046 108 ntBASIC4.55□□□□□ -1.68
MSI1O43347 TAF9BP1-201ENST00000396646 746 ntBASIC4.55□□□□□ -1.68
MSI1O43347 AL139098.1-201ENST00000407291 389 ntBASIC4.55□□□□□ -1.68
MSI1O43347 AC011933.1-201ENST00000413334 321 ntBASIC4.55□□□□□ -1.68
MSI1O43347 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.55□□□□□ -1.68
MSI1O43347 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 ISCA1P2-201ENST00000438679 421 ntBASIC4.55□□□□□ -1.68
MSI1O43347 AC114495.1-201ENST00000441274 436 ntBASIC4.55□□□□□ -1.68
MSI1O43347 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.55□□□□□ -1.68
MSI1O43347 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 NPM1P39-201ENST00000449818 867 ntBASIC4.55□□□□□ -1.68
MSI1O43347 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.55□□□□□ -1.68
MSI1O43347 AC116533.1-201ENST00000459748 321 ntBASIC4.55□□□□□ -1.68
MSI1O43347 RPL35AP15-201ENST00000468042 339 ntBASIC4.55□□□□□ -1.68
MSI1O43347 UBA52P3-201ENST00000491303 382 ntBASIC4.55□□□□□ -1.68
MSI1O43347 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MSI1O43347 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.55□□□□□ -1.68
MSI1O43347 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 MTCO1P49-201ENST00000523429 802 ntBASIC4.55□□□□□ -1.68
MSI1O43347 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MSI1O43347 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.55□□□□□ -1.68
MSI1O43347 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MSI1O43347 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.55□□□□□ -1.68
MSI1O43347 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.55□□□□□ -1.68
MSI1O43347 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.55□□□□□ -1.68
MSI1O43347 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.55□□□□□ -1.68
MSI1O43347 ARF4P1-201ENST00000605447 541 ntBASIC4.55□□□□□ -1.68
MSI1O43347 LINC00901.1-201ENST00000617252 152 ntBASIC4.55□□□□□ -1.68
MSI1O43347 uc_338.13-201ENST00000618243 179 ntBASIC4.55□□□□□ -1.68
MSI1O43347 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MSI1O43347 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MSI1O43347 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MSI1O43347 AC124312.6-202ENST00000623624 418 ntBASIC4.55□□□□□ -1.68
MSI1O43347 OR52H1-202ENST00000641796 1061 ntBASIC4.55□□□□□ -1.68
MSI1O43347 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MSI1O43347 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
MSI1O43347 EIF2AP4-201ENST00000424793 1781 ntBASIC4.55□□□□□ -1.68
MSI1O43347 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSI1O43347 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSI1O43347 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MSI1O43347 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.54□□□□□ -1.68
MSI1O43347 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
MSI1O43347 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
MSI1O43347 RNU6-931P-201ENST00000363850 107 ntBASIC4.54□□□□□ -1.68
MSI1O43347 AC068538.1-201ENST00000376856 336 ntBASIC4.54□□□□□ -1.68
MSI1O43347 RNU6-1200P-201ENST00000384162 107 ntBASIC4.54□□□□□ -1.68
MSI1O43347 RNU1-44P-201ENST00000384453 163 ntBASIC4.54□□□□□ -1.68
MSI1O43347 RNU6-1151P-201ENST00000384684 107 ntBASIC4.54□□□□□ -1.68
MSI1O43347 RNA5SP372-201ENST00000390836 115 ntBASIC4.54□□□□□ -1.68
MSI1O43347 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MSI1O43347 RNU2-42P-201ENST00000410697 113 ntBASIC4.54□□□□□ -1.68
MSI1O43347 RNU6-272P-201ENST00000411028 104 ntBASIC4.54□□□□□ -1.68
MSI1O43347 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.54□□□□□ -1.68
MSI1O43347 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.54□□□□□ -1.68
MSI1O43347 EIF4EP1-201ENST00000422311 642 ntBASIC4.54□□□□□ -1.68
MSI1O43347 AC004448.2-201ENST00000422360 586 ntBASIC4.54□□□□□ -1.68
MSI1O43347 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.54□□□□□ -1.68
MSI1O43347 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.54□□□□□ -1.68
MSI1O43347 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MSI1O43347 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.54□□□□□ -1.68
MSI1O43347 PPIAP17-201ENST00000438507 471 ntBASIC4.54□□□□□ -1.68
MSI1O43347 THAP5P1-201ENST00000439089 262 ntBASIC4.54□□□□□ -1.68
MSI1O43347 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.54□□□□□ -1.68
MSI1O43347 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.54□□□□□ -1.68
MSI1O43347 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MSI1O43347 AC243772.1-201ENST00000451620 410 ntBASIC4.54□□□□□ -1.68
MSI1O43347 RPL12P26-201ENST00000452430 487 ntBASIC4.54□□□□□ -1.68
MSI1O43347 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.54□□□□□ -1.68
MSI1O43347 RPL37P3-201ENST00000456825 293 ntBASIC4.54□□□□□ -1.68
MSI1O43347 TPTE2P5-203ENST00000458118 728 ntBASIC4.54□□□□□ -1.68
MSI1O43347 RN7SL303P-201ENST00000469773 251 ntBASIC4.54□□□□□ -1.68
MSI1O43347 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
MSI1O43347 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms